Gene
| Gene Model ID | pfu_aug1.0_98740.1_71490 |
|---|---|
| Locus | scaffold98740.1 : 1 ... 1529 : - |
| To GenomeBrowser | scaffold98740.1:1..1529 |
| Genes list of scaffold | scaffold98740.1 |
| Synonym | pfu_aug2.0_27.1_23286 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_98740.1_71490.t1 | 1 | 1 | TUDOR | 23 | 140 | 2.4e-29 | 101.6 | 6.2e-33 | 3.1e-29 | 101.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_98740.1_71490.t1 | gi|260825748|ref|XP_002607828.1| | hypothetical protein BRAFLDRAFT_117294 [Branchiostoma floridae] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| trochophore | 1 |
| >Adult tissues | |
| Dshape | 1 |
Transcript
| Transcript ID | pfu_aug1.0_98740.1_71490.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_98740.1_71490.t1 atatggtcaaaatacgaggaaccaaaagaggagattgaggtggtagaagataacacagaacgtaatgtagaatacaaaca agtagtggtaacagaagtaggagatgaactgaaattctacgctcaatatgtagataatggaccacagttagagaagttga tggaacagcttagacaggatatggagaccaatccgcccctcccaggctcctacacacccaaacgaggagacacttgtgct gccaaattctcagctgatgatgaatggtacagagctcgtgtagaaaaggttgaaggaagcaaagttacagtattgtacat cgattatggaaatagggaacaaacccaatcaacaaacctggcgacattgccggcagcgtatcacacattgagtgctcagg ctgtggagtttacactggcttgttcagctctaccaccagatgaggatgccaaatatgatgctctggatgcattttacaat gacatctccaataagcagctcttactaaatgtggagtataagatactaggagcaccttatgcaagtctgatgtaccccga cacaaaggatgat |
|
Protein
| Protein ID | pfu_aug1.0_98740.1_71490.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_98740.1_71490.t1 IWSKYEEPKEEIEVVEDNTERNVEYKQVVVTEVGDELKFYAQYVDNGPQLEKLMEQLRQDMETNPPLPGSYTPKRGDTCA AKFSADDEWYRARVEKVEGSKVTVLYIDYGNREQTQSTNLATLPAAYHTLSAQAVEFTLACSALPPDEDAKYDALDAFYN DISNKQLLLNVEYKILGAPYASLMYPDTKDD |
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