Gene
| Gene Model ID | pfu_aug1.0_9880.1_53441 |
|---|---|
| Locus | scaffold9880.1 : 3970 ... 12705 : - |
| To GenomeBrowser | scaffold9880.1:3970..12705 |
| Genes list of scaffold | scaffold9880.1 |
| Synonym | pfu_aug2.0_1211.1_04889 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_9880.1_53441.t1 | 1 | 1 | Ribosomal_S11 | 1 | 73 | 1.6e-19 | 70.1 | 1.2e-23 | 1.8e-19 | 69.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_9880.1_53441.t1 | gi|126697450|gb|ABO26682.1| | ribosomal protein S14 [Haliotis discus discus] | 7.0e-29 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 1 |
| 8-16cell | 1 |
| egg-Dshape | 1 |
| trochophore | 1 |
| >Adult tissues | |
| Dshape | 1 |
| adductorMuscle | 1 |
| maleGonad | 1 |
| mantle | 1 |
| mantleEdge | 2 |
| mantlePallium | 1 |
| pearlSac | 1 |
Transcript
| Transcript ID | pfu_aug1.0_9880.1_53441.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_9880.1_53441.t1 atgttggcagcccaagatgtggcggaaaaatgtaagaccctcggaataaatgccctccacatcaagcttagagccactgg tggaaacaggaccaagacacctggaccaggggcacagtcagcactcagagccttggcccgatcaggaatgaaaattggta gaatcgaggatgtgacgcccattccctctgacagcaccagaaggaagggaggaagacgtggacgtcgtttgtaa |
|
Protein
| Protein ID | pfu_aug1.0_9880.1_53441.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_9880.1_53441.t1 MLAAQDVAEKCKTLGINALHIKLRATGGNRTKTPGPGAQSALRALARSGMKIGRIEDVTPIPSDSTRRKGGRRGRRL |
|