Gene
| Gene Model ID | pfu_aug1.0_9887.1_60693 |
|---|---|
| Locus | scaffold9887.1 : 15456 ... 17150 : + |
| To GenomeBrowser | scaffold9887.1:15456..17150 |
| Genes list of scaffold | scaffold9887.1 |
| Synonym | pfu_aug2.0_2883.1_12304 |
Manual annotation
| Study field | Reproduction |
|---|---|
| Gene name | C1q domain containing protein |
| Description | Best hit to MgC1q66. 76 bits, 4e-12 |
| mRNA evidence |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_9887.1_60693.t1 | 1 | 1 | C1q | 90 | 212 | 1.4e-25 | 89.7 | 1.3e-29 | 1.9e-25 | 89.2 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 3 |
| >Adult tissues | |
| mantle | 2 |
Transcript
| Transcript ID | pfu_aug1.0_9887.1_60693.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_9887.1_60693.t1 atgcattgcgacacatcgaaaaaattttcggacagactagatccattcaaacgatacaattttgatataaagcaaatgtt attcatacctggctattatcaaggaagattacatgacaaattggatagactcctcggaatcgaatcaaaagatggaacac aacgaagacttctatccagactggaggctctagagaagttggtaaagaaacataagaaggaaaacgacaggagattcctc gataaaagtgatgataaaaaaaccatcgcatttactgtatcgtcatcgaagaatttagaaaatcacaacaaccagagaat catctacgacaaggtgatcacaaacacaggttatgcctacaacaaaaccacaggtatatttacctgtcctgtgtcaggta catacgtcttcacttggtctaccatgtctagttctgccaaacaatattgtattgcgttcatctaccataacggtcacaag ctgatgatgacacacagttatgaaaatacctatggttacaatgaagtagccagcaataccatggtgctctcattgaagaa gaacgaacttgtttggattgggacaactcgtggtacatcctgctatggctacccctacacgggattctctggttggaaat tataa |
|
Protein
| Protein ID | pfu_aug1.0_9887.1_60693.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_9887.1_60693.t1 MHCDTSKKFSDRLDPFKRYNFDIKQMLFIPGYYQGRLHDKLDRLLGIESKDGTQRRLLSRLEALEKLVKKHKKENDRRFL DKSDDKKTIAFTVSSSKNLENHNNQRIIYDKVITNTGYAYNKTTGIFTCPVSGTYVFTWSTMSSSAKQYCIAFIYHNGHK LMMTHSYENTYGYNEVASNTMVLSLKKNELVWIGTTRGTSCYGYPYTGFSGWKL |
|