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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_9901.1_53445
Locus scaffold9901.1 : 1 ... 13895 : -
To GenomeBrowser scaffold9901.1:1..13895
Genes list of scaffold scaffold9901.1
Synonym pfu_aug2.0_604.1_14375

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_9901.1_53445.t1 1 1 Lipase 33 114 1.1e-08 34.6 2.9e-12 1.4e-08 34.3

Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)

Libraries EST count
>Embryonic/Larval stages
mix 1
8-16cell 1
trochophore 1
>Adult tissues
mantle 1

Transcript
Transcript IDpfu_aug1.0_9901.1_53445.t1
Definition-
>pfu_aug1.0_9901.1_53445.t1
atgatacttgtattatatatttttaatcgacattttgttattaagggggaaatttcaaaaacgggattgaggtggggaca
aaatgggacgtttttggcgatacttgttgactggaatgccggtaaattagcactcacccctaaagcctatctccaagtgg
ccatcaattcctatgctatgggggctatactagcttacggactacagaagtacctcgtaaagccgtcgtgtatagaccca
gaaaacgtccactttatcggacacagcgtgggagcccacactgtggcaactgcgggaagcacgttctattcggtcagtgg
gaaaaggattggtaaaataacagatgatttcaataacattggacggcctatcgtgacaaaatgaaaacccccgctgcgac
gtacattacaaaaacttcgcgattgtctgtacaaatccacaaatacgccaattgatacggtatcgaatcgatatgcgata
gaatgtatctga

Protein
Protein IDpfu_aug1.0_9901.1_53445.t1
Definition-
>pfu_aug1.0_9901.1_53445.t1
MILVLYIFNRHFVIKGEISKTGLRWGQNGTFLAILVDWNAGKLALTPKAYLQVAINSYAMGAILAYGLQKYLVKPSCIDP
ENVHFIGHSVGAHTVATAGSTFYSVSGKRIGKITDDFNNIGRPIVTKXKPPLRRTLQKLRDCLYKSTNTPIDTVSNRYAI
ECI

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