Gene
| Gene Model ID | pfu_aug1.0_9901.1_53446 |
|---|---|
| Locus | scaffold9901.1 : 17626 ... 34347 : - |
| To GenomeBrowser | scaffold9901.1:17626..34347 |
| Genes list of scaffold | scaffold9901.1 |
| Synonym | pfu_aug2.0_604.1_14376 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_9901.1_53446.t1 | 1 | 1 | zf-U11-48K | 6 | 32 | 1.9e-11 | 43.3 | 2.1e-15 | 3.2e-11 | 42.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_9901.1_53446.t1 | gi|72159056|ref|XP_791128.1| | PREDICTED: uncharacterized protein LOC586246 isoform X1 [Strongylocentrotus purpuratus] | 1.0e-12 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 1 |
| 8-16cell | 1 |
| trochophore | 2 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_9901.1_53446.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_9901.1_53446.t1 aactatgttggtcgtgagtatgctacatgccccttcaatgctcgtcacgagatgcctaaaccagagctgcgttatcacat tgttaactgcccagacaaagcaatgattgaaccaaatatggcttatgagaaggccaagagggatggggaggggacaatgt ttaagggatgtacagatgtaccagtttatgacaactttgttccccagtgtgatgagaattgggatgaggaaataccaata gtgccaaggattggagtggatcctgccttttttgcaaagatagaccaaagagttttgactactggcttgtcgaaggcaaa gaaaagggactataacagacagatgttcttaccacctgaggagagaaagagttcaaagtag |
|
Protein
| Protein ID | pfu_aug1.0_9901.1_53446.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_9901.1_53446.t1 NYVGREYATCPFNARHEMPKPELRYHIVNCPDKAMIEPNMAYEKAKRDGEGTMFKGCTDVPVYDNFVPQCDENWDEEIPI VPRIGVDPAFFAKIDQRVLTTGLSKAKKRDYNRQMFLPPEERKSSK |
|