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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_99033.1_20858
Locus scaffold99033.1 : 1 ... 1451 : -
To GenomeBrowser scaffold99033.1:1..1451
Genes list of scaffold scaffold99033.1
Synonym pfu_aug2.0_47.1_23323

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_99033.1_20858.t1 1 1 Methyltransf_32 4 331 1.1e-26 93.1 1.2e-26 2.5e-23 82.3

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_99033.1_20858.t1 gi|327272830|ref|XP_003221187.1| PREDICTED: methyltransferase-like protein 25 isoform X1 [Anolis carolinensis] 1.0e-27

Transcript
Transcript IDpfu_aug1.0_99033.1_20858.t1
Definition-
>pfu_aug1.0_99033.1_20858.t1
atggacaagaagaagagtcatgaagtagaggtgatgggggacgtatgtgctgcattagctacagtggagaatgtagacat
ggttgtggatttagggagtggtaagggatatcttagtacacacctcgccttacaacatgagctcaacgtgctgggagtgg
acgcacagaccactaacactgctggagcatccagacggagggaggtactgaccaaacagtgggcgggactgaccaggaat
gccaaggtcaagaacgagaggggagacagcaaaaaactgggcaagaaactgaagaaaaagatgaggaagctgcaagatga
aagggaaggaagaggaaatactgcaaacacagggaaggtgaacgaaaatacaaatgctgtagaaattagtgaggaagtaa
tgtttggggtggggagcttatttctggattccgacagagaagatttattgtctgaagggaaagttgactctgatgcttac
tccattaggactctggaaaaagaagatagaataggtagacaggatgagctggcatcagatgattttgatcctggaagaat
ggaaaagaaaaacgaaaaagatagtgattctcatataggactagactcttctttagatgatgaaacagcaaagctcagta
aatctgatgtaaaacgtgacagtgaaatacctgatgcatcccaaaaggataaggtagcaaagttagttgcttgtaataag
aaagccagtcaacatcattttcctgtaacactatacattgacacaaatacgaacctgacagaggtcatagagcagacgct
agctgccaataaccgtgagttgccagtgaggcacaaagaaggggacgttacaagtaacagggacatgaagttaatgataa
caggacttcacacatgtggagggttaggggccagtaccatgcggttgttcgttacatgtgagcaggctccggtgctgtgt
aacgtggggtgctgttaccatttaatggaggaagaatttgtagcaaatccctattcggagcgtactcaag

Protein
Protein IDpfu_aug1.0_99033.1_20858.t1
Definition-
>pfu_aug1.0_99033.1_20858.t1
MDKKKSHEVEVMGDVCAALATVENVDMVVDLGSGKGYLSTHLALQHELNVLGVDAQTTNTAGASRRREVLTKQWAGLTRN
AKVKNERGDSKKLGKKLKKKMRKLQDEREGRGNTANTGKVNENTNAVEISEEVMFGVGSLFLDSDREDLLSEGKVDSDAY
SIRTLEKEDRIGRQDELASDDFDPGRMEKKNEKDSDSHIGLDSSLDDETAKLSKSDVKRDSEIPDASQKDKVAKLVACNK
KASQHHFPVTLYIDTNTNLTEVIEQTLAANNRELPVRHKEGDVTSNRDMKLMITGLHTCGGLGASTMRLFVTCEQAPVLC
NVGCCYHLMEEEFVANPYSERTQ

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