Gene
| Gene Model ID | pfu_aug1.0_991.1_58340 |
|---|---|
| Locus | scaffold991.1 : 1 ... 15670 : + |
| To GenomeBrowser | scaffold991.1:1..15670 |
| Genes list of scaffold | scaffold991.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_991.1_58340.t1 | 2 | 1 | Ldl_recept_a | 2 | 32 | 1.0e-13 | 50.9 | 1.9e-07 | 0.0014 | 18.4 |
| pfu_aug1.0_991.1_58340.t1 | 2 | 1 | MAM | 40 | 194 | 2.6e-25 | 89.0 | 1.4e-20 | 1.0e-16 | 61.0 |
| pfu_aug1.0_991.1_58340.t1 | 2 | 2 | Ldl_recept_a | 197 | 231 | 1.0e-13 | 50.9 | 1.6e-13 | 1.2e-09 | 37.8 |
| pfu_aug1.0_991.1_58340.t1 | 2 | 2 | MAM | 241 | 287 | 2.6e-25 | 89.0 | 6.1e-10 | 4.5e-06 | 26.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_991.1_58340.t1 | gi|156387854|ref|XP_001634417.1| | predicted protein [Nematostella vectensis] | 9.0e-23 |
Transcript
| Transcript ID | pfu_aug1.0_991.1_58340.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_991.1_58340.t1 gatgtaaatttatatgtgacaatgggaagtgcctgtacgaccagaccatgatatgtaatcgccatgacgactgtggtgat aattcagacgaggtccgactctgcactgtgtctgcaaattgtacgtttgatgacccgtttttgtgtgggtataagttttc tgagatgcagtggtcatctggtccagaaaacagccaatcagctgccactataccttggtcagaccacaccattggtcatt accctggaaaattcatggttggaaagactttgaattttgacacaaacattggaaatttgacttcaccgaggtttatcggt atatcccaactctgtgtccgtttctactacaacattagagggacgctttttgatcggcttcggatttccgcacatgagta cagctccagtggctcgttagtcagcacgcggcaggtttggaactcgataaacggtgagatacaagacatgtggagacttg ggtactttgaccttgctgccggaacctatgctttatcgtttgtgatgagtgatactgagagagttgccattgatgatgtt tttgttcagcatggaatgtgtgatcaatatgattgcactgctagcgagttttcttgtggaaatggcagatgtatagaaca gaaattgatatgtgacaaaaattttgattgcttagacaaatcagatgaaggaactatctgtgagtctttgaagaatgtat cctgcgactttgattctccgtttatgtgtgggtataatgtcgatgagacacttggtgaaacagacttcagatggatccgt cagaatggtccaactccgtctacgttcactggtccactcaatgatcacacaaaaggaaactcaagtgatattgcttaa |
|
Protein
| Protein ID | pfu_aug1.0_991.1_58340.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_991.1_58340.t1 CKFICDNGKCLYDQTMICNRHDDCGDNSDEVRLCTVSANCTFDDPFLCGYKFSEMQWSSGPENSQSAATIPWSDHTIGHY PGKFMVGKTLNFDTNIGNLTSPRFIGISQLCVRFYYNIRGTLFDRLRISAHEYSSSGSLVSTRQVWNSINGEIQDMWRLG YFDLAAGTYALSFVMSDTERVAIDDVFVQHGMCDQYDCTASEFSCGNGRCIEQKLICDKNFDCLDKSDEGTICESLKNVS CDFDSPFMCGYNVDETLGETDFRWIRQNGPTPSTFTGPLNDHTKGNSSDIA |
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