Gene
| Gene Model ID | pfu_aug1.0_99156.1_64193 |
|---|---|
| Locus | scaffold99156.1 : 1 ... 1518 : - |
| To GenomeBrowser | scaffold99156.1:1..1518 |
| Genes list of scaffold | scaffold99156.1 |
| Synonym | pfu_aug2.0_672.1_07778 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_99156.1_64193.t1 | 3 | 1 | Ig_3 | 8 | 23 | 3.5e-07 | 30.6 | 0.17 | 490.0 | 1.3 |
| pfu_aug1.0_99156.1_64193.t1 | 2 | 1 | Ig_2 | 12 | 97 | 1.3e-09 | 38.0 | 1.3e-05 | 0.039 | 14.0 |
| pfu_aug1.0_99156.1_64193.t1 | 3 | 2 | Ig_3 | 72 | 97 | 3.5e-07 | 30.6 | 0.0083 | 25.0 | 5.4 |
| pfu_aug1.0_99156.1_64193.t1 | 1 | 1 | C2-set_2 | 116 | 203 | 2.8e-07 | 30.3 | 2.2e-10 | 6.4e-07 | 29.1 |
| pfu_aug1.0_99156.1_64193.t1 | 2 | 2 | Ig_2 | 121 | 210 | 1.3e-09 | 38.0 | 6.3e-08 | 0.00019 | 21.5 |
| pfu_aug1.0_99156.1_64193.t1 | 3 | 3 | Ig_3 | 121 | 198 | 3.5e-07 | 30.6 | 6.0e-09 | 1.8e-05 | 25.1 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 2 |
| egg-Dshape | 1 |
| trochophore | 1 |
| >Adult tissues | |
| Dshape | 1 |
Transcript
| Transcript ID | pfu_aug1.0_99156.1_64193.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_99156.1_64193.t1 ttttgacgtttgacaatagcaacatcacattgcctttcaatggatcacctctaacattgcgatgtgtggcactttatgcc aacgggtggacggacctaaagatcgttaggaagaatgggaaaagcaggaatgcccttgctgtcgtcacttccggtatcga ttctccaagtgtttatgtgatcgatgccaatttttcgtcggaaatttcgtataaaacagatgcattgatggtgactcttt attcaaatgctgtagattgttcatacactggagaatattcatgcatcatctcaacagtgaaagaaataaaggaaattgac acagaagtccacacgatcgactcgcagcctaaactagagatacccaccagtatagtggaaggagggcaaatcaccctgaa atgttctgtagaggttacaggccagaatgggacaataaaatggaagttaagaccgccaggtttacacacatactttgacc tgagcctatctccgactacaaccaaaacagaaacagagtgttcgactaccatctcaagtgttttgacctttaacccccaa atgcatgataatgggtccttctttagatgcgaagtcgcggacacaggggatacctcaacacaagagaacaccctcttttc tgaagaggaatttttagttgttccaagtaagttggtatttcaaagattgagggaaaagatttaa |
|
Protein
| Protein ID | pfu_aug1.0_99156.1_64193.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_99156.1_64193.t1 LTFDNSNITLPFNGSPLTLRCVALYANGWTDLKIVRKNGKSRNALAVVTSGIDSPSVYVIDANFSSEISYKTDALMVTLY SNAVDCSYTGEYSCIISTVKEIKEIDTEVHTIDSQPKLEIPTSIVEGGQITLKCSVEVTGQNGTIKWKLRPPGLHTYFDL SLSPTTTKTETECSTTISSVLTFNPQMHDNGSFFRCEVADTGDTSTQENTLFSEEEFLVVPSKLVFQRLREKI |
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