Gene
| Gene Model ID | pfu_aug1.0_9921.1_02826 |
|---|---|
| Locus | scaffold9921.1 : 3020 ... 13125 : - |
| To GenomeBrowser | scaffold9921.1:3020..13125 |
| Genes list of scaffold | scaffold9921.1 |
| Synonym | pfu_aug2.0_167.1_23593 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_9921.1_02826.t1 | 4 | 1 | Cnd1 | 17 | 111 | 2.0e-07 | 31.0 | 0.0052 | 3.8 | 7.3 |
| pfu_aug1.0_9921.1_02826.t1 | 4 | 1 | Proteasom_PSMB | 20 | 50 | 3.8e-11 | 41.9 | 0.018 | 13.0 | 3.8 |
| pfu_aug1.0_9921.1_02826.t1 | 8 | 1 | Arm | 31 | 69 | 1.79366e-43 | 144.9 | 3.7e-06 | 0.0028 | 17.4 |
| pfu_aug1.0_9921.1_02826.t1 | 5 | 1 | HEAT_2 | 36 | 107 | 9.6e-19 | 67.4 | 0.00018 | 0.13 | 12.5 |
| pfu_aug1.0_9921.1_02826.t1 | 7 | 1 | HEAT | 43 | 70 | 1.5e-17 | 61.9 | 0.0089 | 6.6 | 7.0 |
| pfu_aug1.0_9921.1_02826.t1 | 3 | 1 | Adaptin_N | 45 | 131 | 6.2e-07 | 28.1 | 0.0021 | 1.5 | 7.0 |
| pfu_aug1.0_9921.1_02826.t1 | 4 | 2 | Proteasom_PSMB | 55 | 118 | 3.8e-11 | 41.9 | 0.0056 | 4.2 | 5.5 |
| pfu_aug1.0_9921.1_02826.t1 | 7 | 1 | HEAT_EZ | 56 | 107 | 2.7e-13 | 49.9 | 0.00024 | 0.18 | 12.3 |
| pfu_aug1.0_9921.1_02826.t1 | 7 | 2 | HEAT | 84 | 113 | 1.5e-17 | 61.9 | 0.47 | 350.0 | 1.7 |
| pfu_aug1.0_9921.1_02826.t1 | 5 | 2 | HEAT_2 | 85 | 191 | 9.6e-19 | 67.4 | 6.8e-08 | 5.0e-05 | 23.4 |
| pfu_aug1.0_9921.1_02826.t1 | 4 | 1 | DNA_alkylation | 92 | 120 | 1.5e-09 | 37.7 | 0.0015 | 1.1 | 8.6 |
| pfu_aug1.0_9921.1_02826.t1 | 7 | 2 | HEAT_EZ | 101 | 152 | 2.7e-13 | 49.9 | 3.6e-06 | 0.0026 | 18.1 |
| pfu_aug1.0_9921.1_02826.t1 | 8 | 2 | Arm | 114 | 154 | 1.79366e-43 | 144.9 | 1.5e-12 | 1.1e-09 | 37.7 |
| pfu_aug1.0_9921.1_02826.t1 | 5 | 3 | HEAT_2 | 128 | 233 | 9.6e-19 | 67.4 | 3.2e-09 | 2.3e-06 | 27.7 |
| pfu_aug1.0_9921.1_02826.t1 | 4 | 2 | Cnd1 | 129 | 162 | 2.0e-07 | 31.0 | 0.44 | 330.0 | 1.0 |
| pfu_aug1.0_9921.1_02826.t1 | 4 | 3 | Proteasom_PSMB | 135 | 203 | 3.8e-11 | 41.9 | 0.016 | 12.0 | 4.0 |
| pfu_aug1.0_9921.1_02826.t1 | 7 | 3 | HEAT | 138 | 155 | 1.5e-17 | 61.9 | 0.0018 | 1.3 | 9.2 |
| pfu_aug1.0_9921.1_02826.t1 | 7 | 3 | HEAT_EZ | 141 | 194 | 2.7e-13 | 49.9 | 1.5e-07 | 0.00011 | 22.5 |
| pfu_aug1.0_9921.1_02826.t1 | 4 | 2 | DNA_alkylation | 141 | 165 | 1.5e-09 | 37.7 | 0.23 | 170.0 | 1.5 |
| pfu_aug1.0_9921.1_02826.t1 | 8 | 3 | Arm | 156 | 195 | 1.79366e-43 | 144.9 | 1.9e-09 | 1.4e-06 | 27.8 |
| pfu_aug1.0_9921.1_02826.t1 | 7 | 4 | HEAT | 169 | 197 | 1.5e-17 | 61.9 | 0.0051 | 3.8 | 7.8 |
| pfu_aug1.0_9921.1_02826.t1 | 3 | 2 | Adaptin_N | 175 | 286 | 6.2e-07 | 28.1 | 6.0e-06 | 0.0044 | 15.3 |
| pfu_aug1.0_9921.1_02826.t1 | 7 | 4 | HEAT_EZ | 183 | 236 | 2.7e-13 | 49.9 | 0.0036 | 2.6 | 8.6 |
| pfu_aug1.0_9921.1_02826.t1 | 4 | 3 | Cnd1 | 188 | 284 | 2.0e-07 | 31.0 | 5.8e-06 | 0.0043 | 16.9 |
| pfu_aug1.0_9921.1_02826.t1 | 8 | 4 | Arm | 198 | 237 | 1.79366e-43 | 144.9 | 3.9e-09 | 2.9e-06 | 26.8 |
| pfu_aug1.0_9921.1_02826.t1 | 7 | 5 | HEAT | 212 | 239 | 1.5e-17 | 61.9 | 0.034 | 26.0 | 5.2 |
| pfu_aug1.0_9921.1_02826.t1 | 5 | 4 | HEAT_2 | 213 | 288 | 9.6e-19 | 67.4 | 1.8e-07 | 0.00013 | 22.1 |
| pfu_aug1.0_9921.1_02826.t1 | 4 | 4 | Proteasom_PSMB | 214 | 394 | 3.8e-11 | 41.9 | 9.0e-09 | 6.6e-06 | 24.6 |
| pfu_aug1.0_9921.1_02826.t1 | 8 | 5 | Arm | 242 | 280 | 1.79366e-43 | 144.9 | 3.4e-06 | 0.0025 | 17.5 |
| pfu_aug1.0_9921.1_02826.t1 | 4 | 3 | DNA_alkylation | 250 | 287 | 1.5e-09 | 37.7 | 0.00024 | 0.18 | 11.2 |
| pfu_aug1.0_9921.1_02826.t1 | 7 | 5 | HEAT_EZ | 251 | 275 | 2.7e-13 | 49.9 | 0.015 | 11.0 | 6.6 |
| pfu_aug1.0_9921.1_02826.t1 | 7 | 6 | HEAT | 252 | 281 | 1.5e-17 | 61.9 | 1.8e-06 | 0.0014 | 18.5 |
| pfu_aug1.0_9921.1_02826.t1 | 8 | 6 | Arm | 282 | 303 | 1.79366e-43 | 144.9 | 0.023 | 17.0 | 5.4 |
| pfu_aug1.0_9921.1_02826.t1 | 5 | 5 | HEAT_2 | 303 | 386 | 9.6e-19 | 67.4 | 6.0e-06 | 0.0045 | 17.2 |
| pfu_aug1.0_9921.1_02826.t1 | 7 | 6 | HEAT_EZ | 309 | 363 | 2.7e-13 | 49.9 | 9.9e-06 | 0.0074 | 16.7 |
| pfu_aug1.0_9921.1_02826.t1 | 8 | 7 | Arm | 329 | 363 | 1.79366e-43 | 144.9 | 4.4e-05 | 0.033 | 14.0 |
| pfu_aug1.0_9921.1_02826.t1 | 4 | 4 | Cnd1 | 337 | 384 | 2.0e-07 | 31.0 | 0.71 | 520.0 | 0.3 |
| pfu_aug1.0_9921.1_02826.t1 | 4 | 4 | DNA_alkylation | 338 | 371 | 1.5e-09 | 37.7 | 0.00049 | 0.36 | 10.2 |
| pfu_aug1.0_9921.1_02826.t1 | 3 | 3 | Adaptin_N | 339 | 385 | 6.2e-07 | 28.1 | 0.0069 | 5.1 | 5.2 |
| pfu_aug1.0_9921.1_02826.t1 | 7 | 7 | HEAT | 342 | 366 | 1.5e-17 | 61.9 | 0.00034 | 0.25 | 11.5 |
| pfu_aug1.0_9921.1_02826.t1 | 7 | 7 | HEAT_EZ | 352 | 384 | 2.7e-13 | 49.9 | 3.8e-05 | 0.028 | 14.9 |
| pfu_aug1.0_9921.1_02826.t1 | 8 | 8 | Arm | 367 | 386 | 1.79366e-43 | 144.9 | 0.01 | 7.5 | 6.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_9921.1_02826.t1 | gi|72113568|ref|XP_794211.1| | PREDICTED: sperm-associated antigen 6 [Strongylocentrotus purpuratus] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 2 |
| egg-Dshape | 1 |
| >Adult tissues | |
| Dshape | 1 |
| maleGonad | 2 |
Transcript
| Transcript ID | pfu_aug1.0_9921.1_02826.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_9921.1_02826.t1 atgagccagcggcaagttttacaagtatttgagcaatatcaaaaggccaggacacagtttgtccaaacagtggcagagtt agccagtaggccacagaatattgaaaccttacaaaatgctggagttatgtcccttctcagacctttgcttttggacattg taccaacaattcaacagactgcagcattggctctaggacgtttagcaaactacaatgatgatttggcagaggctgttgta aagggagatattctaccacagcttgtgtattcccttgcagaacaaaatagattttacaagaaagctgcagcttttgttct gagggcagtagccaagcattcacctcagctagcccagtctgtagttgattgtggtgcgctagatgccttggttatatgtt tagaggaatttgatcctggagtgaaggaagcagctgcatgggctctcggctatattgctagacacaacgctgagcttgca caggctgttgtggacgcaggagctgtaccattattagtattatgcatccaggaacctgaactttccctgaagagaattgc agcatctgcccttagtgatatctgtaaacattccccagaactggcacaaacagtggtggatgcaggggccatagctcacc tcgctcaaatgatcctcaatcctgacgctaaacttaagagacaagttttctctgccctgagtcaaatttccaaacattca gttgatcttgctgaaatggtagtagaagcagagattttcccagcagtattgacctgccttaaagatccagatgagtatgt gaagaaaaacgtagcaacactgattagagagatagccaaacatacaccagagcttgcccagctgatagtgaatgccggtg gcgtagctgctgttgtggattatgtaggagagtcaaagggaaatgtccgattgccaggaatcatgatgttaggatatgta gccgctcactcggaaaatctcgcaatggccgttattgtatcaaaaggagtagtacagttagctatagcattatcggagga gccagaggatcacatacaggctgccgcggcatgggcgttaggacaaataggtcgtcatacacccgagcatgctaaagcag tcgctgttgctaacgtattacccaaacttttacagtgctatctcagagccgatgcctcagaagacctacagactaagata ttattccccaggatactctga |
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Protein
| Protein ID | pfu_aug1.0_9921.1_02826.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_9921.1_02826.t1 MSQRQVLQVFEQYQKARTQFVQTVAELASRPQNIETLQNAGVMSLLRPLLLDIVPTIQQTAALALGRLANYNDDLAEAVV KGDILPQLVYSLAEQNRFYKKAAAFVLRAVAKHSPQLAQSVVDCGALDALVICLEEFDPGVKEAAAWALGYIARHNAELA QAVVDAGAVPLLVLCIQEPELSLKRIAASALSDICKHSPELAQTVVDAGAIAHLAQMILNPDAKLKRQVFSALSQISKHS VDLAEMVVEAEIFPAVLTCLKDPDEYVKKNVATLIREIAKHTPELAQLIVNAGGVAAVVDYVGESKGNVRLPGIMMLGYV AAHSENLAMAVIVSKGVVQLAIALSEEPEDHIQAAAAWALGQIGRHTPEHAKAVAVANVLPKLLQCYLRADASEDLQTKI LFPRIL |
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