Gene
| Gene Model ID | pfu_aug1.0_9936.1_60700 |
|---|---|
| Locus | scaffold9936.1 : 22276 ... 29431 : + |
| To GenomeBrowser | scaffold9936.1:22276..29431 |
| Genes list of scaffold | scaffold9936.1 |
| Synonym | pfu_aug2.0_474.1_14200 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_9936.1_60700.t1 | 2 | 1 | 7TM_GPCR_Srw | 50 | 67 | 1.1e-12 | 47.7 | 0.04 | 74.0 | 2.3 |
| pfu_aug1.0_9936.1_60700.t1 | 2 | 2 | 7TM_GPCR_Srw | 64 | 169 | 1.1e-12 | 47.7 | 1.2e-15 | 2.3e-12 | 46.7 |
| pfu_aug1.0_9936.1_60700.t1 | 1 | 1 | 7TM_GPCR_Srsx | 67 | 175 | 2.3e-06 | 26.9 | 1.9e-09 | 3.5e-06 | 26.3 |
| pfu_aug1.0_9936.1_60700.t1 | 1 | 1 | 7tm_1 | 73 | 176 | 4.7e-10 | 39.0 | 3.8e-13 | 7.1e-10 | 38.4 |
Transcript
| Transcript ID | pfu_aug1.0_9936.1_60700.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_9936.1_60700.t1 atggacgattttgtcaccaccgatgccatctcaatgttttctactgacggagacgacacggttagcgagtccacaccatt aacagcagcaccaagagcagtcctaatcccctgggacaatccattcaacatcatgaccaaacagagttcagatgaagcag tcttcgtcatgcaatgcgttctgctgcctatcctcaccgtttggggcgtggtcgggaatgtcttgagcctgatagtactc ctacacaagaagctccgctccagtactggggtaattctcgtaggccttgccctagcagatctattatccctactctccaa catgatacgaaaatccaccggtattatcggtgaatttgacatgaactttgccgacaagtacaaggcaatgatgttcggtc cgattttctacctaaaaacctcatttgaccgaatctcggtttggcttgtggtcttgatatccattgaaagatttctagca gtatctttcccgctcaaaatcaaaatctgggtgtctaaagcgcatattgcaagtggtaataaaactagtagtaaatttaa tatcaaatcatgttaa |
|
Protein
| Protein ID | pfu_aug1.0_9936.1_60700.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_9936.1_60700.t1 MDDFVTTDAISMFSTDGDDTVSESTPLTAAPRAVLIPWDNPFNIMTKQSSDEAVFVMQCVLLPILTVWGVVGNVLSLIVL LHKKLRSSTGVILVGLALADLLSLLSNMIRKSTGIIGEFDMNFADKYKAMMFGPIFYLKTSFDRISVWLVVLISIERFLA VSFPLKIKIWVSKAHIASGNKTSSKFNIKSC |
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