Gene
| Gene Model ID | pfu_aug1.0_9939.1_60702 |
|---|---|
| Locus | scaffold9939.1 : 17956 ... 23389 : + |
| To GenomeBrowser | scaffold9939.1:17956..23389 |
| Genes list of scaffold | scaffold9939.1 |
| Synonym | pfu_aug2.0_113.1_10295 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_9939.1_60702.t1 | 2 | 1 | NHL | 27 | 55 | 1.1e-16 | 59.7 | 1.7e-11 | 2.5e-07 | 30.2 |
| pfu_aug1.0_9939.1_60702.t1 | 2 | 2 | NHL | 81 | 109 | 1.1e-16 | 59.7 | 1.4e-10 | 2.1e-06 | 27.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_9939.1_60702.t1 | gi|74209031|dbj|BAE21243.1| | unnamed protein product [Mus musculus] | 1.0e-32 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_9939.1_60702.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_9939.1_60702.t1 atgagaattcctaaagggaaacacgacccagatttggtacttggtgagttcttggtacccgggaacgacgataagcattt ctgtaagcccacggacgtcgccgttacgtcatctggggagtttttcgtatcagatgggtactgcaatggaagaattctga agtatgacagcaatggaaaacttctcactcagtggggacaacaatttacagggcgagcaagtcaggccggaactcatgga ctatacattccccatagtctcactctacttgaaaaacaagatagaatatgtgtggctgacagagaacatggcaggattca atgttacaatgcagggattaagaaccctgctactgctggacagtttgtgaaaagtatcgaacacgcagagtttggaaaag tgttcgctatctcctatgacccaaaagataatccatatgacattgattaa |
|
Protein
| Protein ID | pfu_aug1.0_9939.1_60702.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_9939.1_60702.t1 MRIPKGKHDPDLVLGEFLVPGNDDKHFCKPTDVAVTSSGEFFVSDGYCNGRILKYDSNGKLLTQWGQQFTGRASQAGTHG LYIPHSLTLLEKQDRICVADREHGRIQCYNAGIKNPATAGQFVKSIEHAEFGKVFAISYDPKDNPYDID |
|