Gene
| Gene Model ID | pfu_aug1.0_994.1_43874 |
|---|---|
| Locus | scaffold994.1 : 70066 ... 96654 : + |
| To GenomeBrowser | scaffold994.1:70066..96654 |
| Genes list of scaffold | scaffold994.1 |
| Synonym | pfu_aug2.0_996.1_21326 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_994.1_43874.t1 | 1 | 1 | C2 | 6 | 72 | 1.1e-09 | 37.9 | 5.1e-13 | 2.5e-09 | 36.8 |
| pfu_aug1.0_994.1_43874.t1 | 3 | 1 | WW | 140 | 169 | 5.1e-28 | 96.5 | 2.5e-13 | 1.2e-09 | 37.7 |
| pfu_aug1.0_994.1_43874.t1 | 3 | 2 | WW | 241 | 270 | 5.1e-28 | 96.5 | 2.2e-10 | 1.1e-06 | 28.4 |
| pfu_aug1.0_994.1_43874.t1 | 3 | 3 | WW | 289 | 318 | 5.1e-28 | 96.5 | 5.8e-13 | 2.9e-09 | 36.6 |
| pfu_aug1.0_994.1_43874.t1 | 1 | 1 | HECT | 426 | 713 | 0.0 | 280.4 | 0.0 | 0.0 | 278.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_994.1_43874.t1 | gi|297595322|gb|ADI48176.1| | SMURF2 [Crepidula fornicata] | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_994.1_43874.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_994.1_43874.t1 atggaatcatggctgcaaggtttgccggatccgtttgccaagatcagtgttgatggctctggacaatgtcattccactga cacaagtaaaaatactctagatccgaaatggaaccaacattatgacctatacatcggtagtaaggactcgataactataa gtgtatggaatcacaagaagatccacaagaagcagggagctggcttcctaggctgtgtcaggatcatgtcaaatgccata caacagctcaaagacactggatttcagcgcctggatttacaaagaaacaactcggatgacaacgacaatgtccggggaca gatcgtcatcagcctcatctcgcgggaccgaggggggtcgggatcaggtccagtcaacactgatgccccagcatcgatcc ctagcgatcctaacgagctaccggagggatgggaggaaagacggacggccagcggtcgtgtacattatgttaaccatata acacggtcaacacaatgggagagacctacaaggccggcctcagaatgcatcagaaatagtcagtctagtaacagtattca gggcggacagtcagcgggcaataatcggactaaccgggccagtaataataacaacaatgagagtgaccgggagggcacaa ataacccagccctgccccgccgacggtcaacccgacacagaaattacctcaatagatcacaactacacaatgcaatagaa ctacctgatggatatgagcagaggacgactcagcagggtcaggtttacttcttgcatacccgtacaggggtcagtacgtg gcacgaccccagggtccccagggatttgtcgagcacggaggtccaggatgaagaattaggcactttaccagcgggctggg aagtgcgacacacgggaaatggacgagtatattttgttgaccacaataaccgtactacacagttcacagatcctcgactg tctgcaaacatccatctgatccagacaagaccacctcctgcatatgctccgaggagcgatgacaaagagaatgattcccc tgtgccaaaatacaaaagagatcttgtacagaaaatgaagatactgaagcaggagctccagagtttacagccgcaaggtg gtcattgtcgaatggaagtgtccagagaagaaattttcgaggactcgtatcgacaagtaatgaaattacgagccaaagac ttgaggaagcgcttgatggtcaagtttcgaggggaggagggattggactatggaggagtggccagggagtggttgtacct tttatctcatgagatgctgaatccatactatgggctgtttcagtatgccagggatgatatttatactctacaaatcaacc cagactctggtgtcaatcctgagcacttgtcatactttcactttgttgggaggattataggtcttgccatatttcacggt cattacctggatggtggttttaccatgccattttataagcagctacttagcaaaccggtgaccttaggtgaccttgagga tgttgaccctgagcttcaccgtagtctggtctggttactggacaataatatagaatcggtgctggaccatactttctctg ttgaacataattcatttggacaagtccaagaatatgaactgaagcctggaggaaaattaacgaaagtcactgaggacaat aagtctgaatatgttaggttatatgtacaatggaggtttatgaggggtatagaggctcagttcttagctcttcagaaagg cttcaatgaaatcattcctcagcacttactcaaaccttttgatgaaagggagttagagcttatgatagggggtttaggta aaatagacttagaagattggaaatctcacacacggttaaagcactgtacaccagacagtaatatagtcaagtggttttgg cgagcggtagatacgttcgacgatgagatgagggcgagactgctacagtttgttactggaagctcacgtgtcccactcca gggattcaaggctctacaaggttctactggtgctgctggaccaagtttcaacagaattgacatccctccatatgaatcgt atgagaaactttcagcaaaactgacatgtgcagtggaagagacttgtggatttgctgtggaatga |
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Protein
| Protein ID | pfu_aug1.0_994.1_43874.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_994.1_43874.t1 MESWLQGLPDPFAKISVDGSGQCHSTDTSKNTLDPKWNQHYDLYIGSKDSITISVWNHKKIHKKQGAGFLGCVRIMSNAI QQLKDTGFQRLDLQRNNSDDNDNVRGQIVISLISRDRGGSGSGPVNTDAPASIPSDPNELPEGWEERRTASGRVHYVNHI TRSTQWERPTRPASECIRNSQSSNSIQGGQSAGNNRTNRASNNNNNESDREGTNNPALPRRRSTRHRNYLNRSQLHNAIE LPDGYEQRTTQQGQVYFLHTRTGVSTWHDPRVPRDLSSTEVQDEELGTLPAGWEVRHTGNGRVYFVDHNNRTTQFTDPRL SANIHLIQTRPPPAYAPRSDDKENDSPVPKYKRDLVQKMKILKQELQSLQPQGGHCRMEVSREEIFEDSYRQVMKLRAKD LRKRLMVKFRGEEGLDYGGVAREWLYLLSHEMLNPYYGLFQYARDDIYTLQINPDSGVNPEHLSYFHFVGRIIGLAIFHG HYLDGGFTMPFYKQLLSKPVTLGDLEDVDPELHRSLVWLLDNNIESVLDHTFSVEHNSFGQVQEYELKPGGKLTKVTEDN KSEYVRLYVQWRFMRGIEAQFLALQKGFNEIIPQHLLKPFDERELELMIGGLGKIDLEDWKSHTRLKHCTPDSNIVKWFW RAVDTFDDEMRARLLQFVTGSSRVPLQGFKALQGSTGAAGPSFNRIDIPPYESYEKLSAKLTCAVEETCGFAVE |
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