Gene
| Gene Model ID | pfu_aug1.0_9946.1_10035 |
|---|---|
| Locus | scaffold9946.1 : 19058 ... 25151 : - |
| To GenomeBrowser | scaffold9946.1:19058..25151 |
| Genes list of scaffold | scaffold9946.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_9946.1_10035.t1 | 1 | 1 | RVT_1 | 737 | 860 | 8.7e-06 | 25.2 | 9.8e-09 | 2.4e-05 | 23.7 |
| pfu_aug1.0_9946.1_10035.t1 | 2 | 1 | Peptidase_A17 | 927 | 1087 | 6.2e-38 | 130.1 | 3.3e-40 | 8.1e-37 | 126.5 |
| pfu_aug1.0_9946.1_10035.t1 | 2 | 2 | Peptidase_A17 | 1235 | 1271 | 6.2e-38 | 130.1 | 0.17 | 410.0 | 0.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_9946.1_10035.t1 | gi|115752645|ref|XP_785317.2| | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_9946.1_10035.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_9946.1_10035.t1 taagaacgctaaagctcaggaggactcaaaagaaaagttcaagtctccgctgcagtcaggacttaaggtgaaaaaacttg attctcctcaattctcgggaattattcgagactatcctagttttaaacgtgactacgacaggcatatgattccttctttc ggacttgaccctttcgcattaaagaaatgtttaagtggtgaggcgctgtctactgtcaaaggggtagatgatgactttaa tgaaatgtttcgaaggttggatctaaaatatggaagaccagaaaagctatcagatgctgtacttcaggaactgaagggtc ttactgctttgcgagacggtgataatcaaggattcataaagatggtggatgtaattgagaactgctggcttgatttgaga aaggctggactagaatctgagatgaacacttcaactatggtcagtcaaattgagaagttattaccgtctgtgcaaaaaag agaatgggtcattatgaaacaacaactgaaatcttccgaatatagggaaatattcaaaactttcttggaatttttacttc gtgaaaagatggctctagagtatatggaaaatgaatttcgcaaggaaggtaacacaactcgtggtagagtgcatttagct tcaggggatggatcgtctacggaggctcaaacggatcaaatcacggacaaattagatcttgtattgaatcaagtggtaga gggattggctcaggtggcggaagttatgggtacaaagaaagacggaaatgaatctatgtggcgaggaggcaatagtgctc gtagatggaaatgttggtaccacaatgttgacactcatgaaataggaaagtgcactggatttgcaaatctggatttgaat gaaaaaatggatcaactgcgcaggaacggagggtgtttcagttgtttaaagcaaggacacttatcgagcagatgtcatga tcgcaagaaatgcgaagtgcaaggatgtgacaaaatgcaccactcagtactccatgatcagaaaaaatctggtatcgtat cacatcatgatgctttacgaatagtaaatgatgaccacgtaaatcgtacaaataggacattactgatgcttagtgaagtc agtacttcgtccggatctcttactacactttgggatcctggagcaaacatgtctctcataacccatagtgcggcaaatag acttggacttacaggcaaagaggtcacattatcgttaactaaagtagggaattcgtgcgagacagtgccaagcaaagaat accttattcctctgtgtgatcgggaagggcaggaatggaacataagggcttatggaattgaggaagtcaccgctagcgtt gactacgtagatgttaggcaagttgccagcttgttttcgggaataacggaaggggacatcaagaggcccactggaaaggt tgatttgcttgtcggaactgattgttgtattctgcttccagaaaaggtccaggaatttggaggacttcagttaatgaaga atcagtttggatattgtttgcgtggaaaacatgaactcttggataatcagtcttccgagggatgcaacctgatacagata cattttacctcaggaatacttttcaataatgtgaatgacgatattctcatctcggatcgaccgtctgtcaagtcagactt agagactttctttgctatagagagccttggtacggagtgcacaccgaagtgtggtggttgcaggtgtggcaaatgtcctg taggaggaaaaacatacaccattaaggaagaaagggaactttccctcatccaagaaggacttaaacttgataagcaagct aagtgttgggttgttacctatccatggatacgaaatccatatgaactgccaaacaactactttgcagcaaaggcgagact tcagtcaactgagcgcagactgctccgaaagggggatgaatatgtgaaactttatgatatgcagatacaggatatgatca accgagacgtcgcattgaaattaaacgactgtgatcttgataggtacaaaggaccaatttattacttgcctcaccacgaa gtgttaaagcctgactcaaagtcgacaccgctacgaatcgtatttaattcgtcagcaatatttatgggacacaatctgaa cgagtactgggcaaagggaccaaatatgttgaatgacctactctctgttttgctaacgttcaggcaagacaaaatagctg tggcgggagacatatcaaagatgtataacaccgttcaaatcagtcaaatggaccagcatacacaccgttttctttggaga aacatggacgcatcaagagacccagatcactatgtattgaggactgttacattcggagacagacctagcggtgcgattgc aaccatggctcttcggaatactgctaaacttttggaggaggagtatcccgaagcttgtggcgttatcttagagaacagtt atgtagatgacatacttttctcagttagtagcagtcaagttgcagaaaggattgcagaagaaatagatttggtgcttggg gaaggaggatttcgtgtgaaaaattggactttttctaaaggacatcaagtagtgtcacaggtgattcaatccgaaaagat tcttggaatgatatgggagccttacagtgacatgtttgaattcaaggccaaactcaatttctcgccaaaggagaaaaaga tacatcaaggagaagatctgcatagtcatgaggttccaacgaagataccagaaatgctgactcgtcgaatgatactcagt caggtgtcgagtatatttgatccgttggggctaatatccccatttgttcttcgatcaaaattattgctgcgttctttgtg tatgataggcagtacagatgataagaaggagggttgggatgtccccattgatgaacatagtcgacaagagtggatacagt tctttcacgaccttttcttggtggaagcactagaatttcccagatgtattaaaccagaaggagcatatgggaaaccgatc ttagttatattctcggatggaagtaaatatgcgtatggagcttgtgcttatgtacgctggaggatggaagatggattgtt ccaatcatgcctagtagctgcgaaaaatcggattgctcctacgcgccaattgtcaattccaagattggaactttgtggag ctctgctaggcgcaaggttgcgtgaaaggcttgttagagatctttcctatgagtttgaagaagtgtatcatattgttgac tcgatgatagttagagcacaaattcaaaaggagagttacggatttgggacatttacagctactagggtcgcagagattca gaacaagacgaacaaggaggaatggtggtggatagcaggtgaatgtaatccagctgaccttactacaaggggcactcatc cgggtgatcttaaggaaggttcgatatggcaaagaggaccagatttcatgactaatccaatcatcgattggcctataagc aaagtctgcaacatttcacagttgccagatactgtgatcggagtagttcacaatacaactgtggatcatgaagcattcag ccgtaaatttgacgatatagacctcaatcgtttcaacaatatggataaactgttgcgtgtgaccagtattattctgaaga ttgcgaaaaagaaatccttccgagttgaaggaaaaaacttctctgtccaggaattagaggaagcagagtttgaatgggtg aaatatgtacaacaggatctgggaactgaatggaggaagtctttcaaaaaccttggtgttgacatcaacaaagatggtgc tattgtagtaggcagtagaatggcagaatggttaaaggagacttggaatcggacagagtttattctcctcccatcgaagt caagcttcactcaaatttgcttgactacgctccacaacaatgaccatggtgggattgattcgactctcgcaaagctaaga agcaaatattggatacccggtgctcacaaattactcaaaggtatacgtagcaaatgtgtcgtctgtcgaaagagacaaaa ggttaaacaaactcaatgtatgggaaggctaccgttggacagactcaaaccttcgcctgcgttcttctactctgccgtag acctttttggacccttcacaattcgagatactgttaagaagaggacacacggtaaagcatttggggtcatatttacctgt ctcacaacaagaggggtgtacttggatctagcagacagctacagtacggatagcttcttgatggttttgaggagatttgt atctatccatggatacccccgtaaattgagatctgacgttggcacccagcttgtttccgccagtaaagagttaaaggaga tgaacaagaactgggactggaaaaggatagaggcgcatggagttcattcagggatggattgggaattcaacaaatccgca gatgcaccatgggaaaacggttgctgtgaggcccttattaaaactgcaaaatcttgtttgagggcagccgttggcgatgc tgtgatgtcgtttccagaactgcagactgttctctttgaagctgctaattgtatgaatgagagacctattggaatgaaga atggcgatccaaatgaaggtacctacctttgtccgaacgatttgcttttgggtagggcgtcatcaaaggttccacccgga acctggtcagataaggattgtttcaagagtcgttggaaatttgtgcaaaggatagtggacgccttttggaagaagtggat gcgggatttctttccttccctcatagttcgacaaaaatggcatgtaacaaccagaaacatgcagattggggacgttgttt tggttcaagacagtaatgctattcgagggctatggaaattggctcaggtcaccaaagtatttcccagtaaggataacgtt gtccgtgatgttgaactccgttataaagtgcaagaggatggtccagattaccgaggacaaacagatacaaacattcacag atccgttcatcgactggttgtaattcttccgatagaagaacaaatttaa |
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Protein
| Protein ID | pfu_aug1.0_9946.1_10035.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_9946.1_10035.t1 KNAKAQEDSKEKFKSPLQSGLKVKKLDSPQFSGIIRDYPSFKRDYDRHMIPSFGLDPFALKKCLSGEALSTVKGVDDDFN EMFRRLDLKYGRPEKLSDAVLQELKGLTALRDGDNQGFIKMVDVIENCWLDLRKAGLESEMNTSTMVSQIEKLLPSVQKR EWVIMKQQLKSSEYREIFKTFLEFLLREKMALEYMENEFRKEGNTTRGRVHLASGDGSSTEAQTDQITDKLDLVLNQVVE GLAQVAEVMGTKKDGNESMWRGGNSARRWKCWYHNVDTHEIGKCTGFANLDLNEKMDQLRRNGGCFSCLKQGHLSSRCHD RKKCEVQGCDKMHHSVLHDQKKSGIVSHHDALRIVNDDHVNRTNRTLLMLSEVSTSSGSLTTLWDPGANMSLITHSAANR LGLTGKEVTLSLTKVGNSCETVPSKEYLIPLCDREGQEWNIRAYGIEEVTASVDYVDVRQVASLFSGITEGDIKRPTGKV DLLVGTDCCILLPEKVQEFGGLQLMKNQFGYCLRGKHELLDNQSSEGCNLIQIHFTSGILFNNVNDDILISDRPSVKSDL ETFFAIESLGTECTPKCGGCRCGKCPVGGKTYTIKEERELSLIQEGLKLDKQAKCWVVTYPWIRNPYELPNNYFAAKARL QSTERRLLRKGDEYVKLYDMQIQDMINRDVALKLNDCDLDRYKGPIYYLPHHEVLKPDSKSTPLRIVFNSSAIFMGHNLN EYWAKGPNMLNDLLSVLLTFRQDKIAVAGDISKMYNTVQISQMDQHTHRFLWRNMDASRDPDHYVLRTVTFGDRPSGAIA TMALRNTAKLLEEEYPEACGVILENSYVDDILFSVSSSQVAERIAEEIDLVLGEGGFRVKNWTFSKGHQVVSQVIQSEKI LGMIWEPYSDMFEFKAKLNFSPKEKKIHQGEDLHSHEVPTKIPEMLTRRMILSQVSSIFDPLGLISPFVLRSKLLLRSLC MIGSTDDKKEGWDVPIDEHSRQEWIQFFHDLFLVEALEFPRCIKPEGAYGKPILVIFSDGSKYAYGACAYVRWRMEDGLF QSCLVAAKNRIAPTRQLSIPRLELCGALLGARLRERLVRDLSYEFEEVYHIVDSMIVRAQIQKESYGFGTFTATRVAEIQ NKTNKEEWWWIAGECNPADLTTRGTHPGDLKEGSIWQRGPDFMTNPIIDWPISKVCNISQLPDTVIGVVHNTTVDHEAFS RKFDDIDLNRFNNMDKLLRVTSIILKIAKKKSFRVEGKNFSVQELEEAEFEWVKYVQQDLGTEWRKSFKNLGVDINKDGA IVVGSRMAEWLKETWNRTEFILLPSKSSFTQICLTTLHNNDHGGIDSTLAKLRSKYWIPGAHKLLKGIRSKCVVCRKRQK VKQTQCMGRLPLDRLKPSPAFFYSAVDLFGPFTIRDTVKKRTHGKAFGVIFTCLTTRGVYLDLADSYSTDSFLMVLRRFV SIHGYPRKLRSDVGTQLVSASKELKEMNKNWDWKRIEAHGVHSGMDWEFNKSADAPWENGCCEALIKTAKSCLRAAVGDA VMSFPELQTVLFEAANCMNERPIGMKNGDPNEGTYLCPNDLLLGRASSKVPPGTWSDKDCFKSRWKFVQRIVDAFWKKWM RDFFPSLIVRQKWHVTTRNMQIGDVVLVQDSNAIRGLWKLAQVTKVFPSKDNVVRDVELRYKVQEDGPDYRGQTDTNIHR SVHRLVVILPIEEQI |
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