Gene
| Gene Model ID | pfu_aug1.0_995.1_65728 |
|---|---|
| Locus | scaffold995.1 : 83782 ... 87625 : - |
| To GenomeBrowser | scaffold995.1:83782..87625 |
| Genes list of scaffold | scaffold995.1 |
| Synonym | pfu_aug2.0_409.1_30733 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_995.1_65728.t1 | 1 | 1 | SPRY | 95 | 217 | 1.8e-17 | 63.6 | 3.8e-21 | 2.8e-17 | 62.9 |
| pfu_aug1.0_995.1_65728.t1 | 1 | 1 | SOCS_box | 226 | 259 | 3.7e-08 | 33.0 | 9.6e-12 | 7.1e-08 | 32.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_995.1_65728.t1 | gi|291235289|ref|XP_002737573.1| | PREDICTED: SPRY domain-containing SOCS box protein 3-like [Saccoglossus kowalevskii] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_995.1_65728.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_995.1_65728.t1 atgatagatattttatcgacctatagacagagtgtgtatttgttgtacattgatttttctgccattgtgtatgtacatcg ggaggctgagtcagggatggtgatactgagttggcagcatcaggtattgatccgagatggctgcgaggaaacctggacct ggaataaaagggacagatcgcacgaagttcggctaaagggaaatagttcacagacggcgctgttccacccgaactggtcc aacgggaccgcgggggtacggggaaacaaacccctgaactatggcagacattactgggaaatcaaagtatcccaaaggat attcgggaccagcatgatgttcggtatcggaaccaggaacgcaagattgcatgttgatgcgttcgtgaatttgataggag aggatggacatagctgggggttgtcccataaaggactgctgtggcacgacggacaatgggcgcagtacacgaaacctttc agagaaaacgaagcaacaacgatcggcatattgttcgactggtttgaagggacgctatcatatttcaaagacggtgcttg tttgggtgtggcattttcaggactaaatgagatagaggaagacttgtatcccctcgtgtgctctaccgcagctaagactg agatgaccctgggtgtgcggcggagggggtacctaagcctccaggaccgatgtcgtgcggctatactatccagagtaaag gaggaggacagcattgaccatctcccactacccagcaggatgctcagcttcttgaaggacgttcaatga |
|
Protein
| Protein ID | pfu_aug1.0_995.1_65728.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_995.1_65728.t1 MIDILSTYRQSVYLLYIDFSAIVYVHREAESGMVILSWQHQVLIRDGCEETWTWNKRDRSHEVRLKGNSSQTALFHPNWS NGTAGVRGNKPLNYGRHYWEIKVSQRIFGTSMMFGIGTRNARLHVDAFVNLIGEDGHSWGLSHKGLLWHDGQWAQYTKPF RENEATTIGILFDWFEGTLSYFKDGACLGVAFSGLNEIEEDLYPLVCSTAAKTEMTLGVRRRGYLSLQDRCRAAILSRVK EEDSIDHLPLPSRMLSFLKDVQ |
|