Gene
| Gene Model ID | pfu_aug1.0_995.1_65729 |
|---|---|
| Locus | scaffold995.1 : 93934 ... 101935 : - |
| To GenomeBrowser | scaffold995.1:93934..101935 |
| Genes list of scaffold | scaffold995.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_995.1_65729.t1 | 1 | 1 | LRR_9 | 9 | 105 | 1.3e-40 | 138.7 | 6.86636e-44 | 1.7e-40 | 138.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_995.1_65729.t1 | gi|260821402|ref|XP_002606022.1| | hypothetical protein BRAFLDRAFT_115963 [Branchiostoma floridae] | 9.99995e-41 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| trochophore | 1 |
| >Adult tissues | |
| maleGonad | 1 |
Transcript
| Transcript ID | pfu_aug1.0_995.1_65729.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_995.1_65729.t1 atgaaatctttcgtattctataggcgtatagcagagaatcttgaagaatccctgccagcattggacacgttaatattgtc taacaacaacatgttagaattaggagatctggatgccttgtcaactgtcaaaaatctcaaacatctaagtttgctcagaa atcctgtccaagcaaagaaacactacagattatatgtaatccacaaagtaccacaactcagggtgcttgacttccaaaga atcaggcaaaaggaaagagaggctgctggtaaattgttccgagggaagaaaggtacagctctggctgccgacatcggtaa gagaagtaagacgtttactcctggagagaaactaccagacaagccatcagggccgtctaaagaagacattaaccttatca agactgattatgacatcatcaaattctttggaaacagtcctaaaagtctgggaaatgacggcaccataccattttcatga |
|
Protein
| Protein ID | pfu_aug1.0_995.1_65729.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_995.1_65729.t1 MKSFVFYRRIAENLEESLPALDTLILSNNNMLELGDLDALSTVKNLKHLSLLRNPVQAKKHYRLYVIHKVPQLRVLDFQR IRQKEREAAGKLFRGKKGTALAADIGKRSKTFTPGEKLPDKPSGPSKEDINLIKTDYDIIKFFGNSPKSLGNDGTIPFS |
|