Gene
| Gene Model ID | pfu_aug1.0_9952.1_46129 |
|---|---|
| Locus | scaffold9952.1 : 42246 ... 44188 : + |
| To GenomeBrowser | scaffold9952.1:42246..44188 |
| Genes list of scaffold | scaffold9952.1 |
| Synonym | pfu_aug2.0_754.1_14537 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_9952.1_46129.t1 | 1 | 1 | U-box | 27 | 98 | 3.2e-30 | 103.8 | 2.7e-34 | 3.9e-30 | 103.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_9952.1_46129.t1 | gi|339236327|ref|XP_003379718.1| | putative tetratricopeptide repeat-containing domain protein [Trichinella spiralis] | 2.00386e-43 |
Transcript
| Transcript ID | pfu_aug1.0_9952.1_46129.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_9952.1_46129.t1 atgcagaaggtggaaggaaagatcaaacagttgaatgagttgttttcacaagtggatgaaaggcgaaagcagagagatgt accggactacctctgtgggaagataagcttcgagctgatgagagatcctgtgataactccaagtggaataacttacgaca aaaaagatatcgttgagcatttacaacgtgtcggccattttgatccggtgacgagaacagatctgactcaggatcaatta attcctaatttatcaatgaaggaagtagtagacaattatctagaagaaaatccatgggcggaagactactga |
|
Protein
| Protein ID | pfu_aug1.0_9952.1_46129.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_9952.1_46129.t1 MQKVEGKIKQLNELFSQVDERRKQRDVPDYLCGKISFELMRDPVITPSGITYDKKDIVEHLQRVGHFDPVTRTDLTQDQL IPNLSMKEVVDNYLEENPWAEDY |
|