Gene
Gene Model ID | pfu_aug1.0_9955.1_46132 |
---|---|
Locus | scaffold9955.1 : 8756 ... 11917 : + |
To GenomeBrowser | scaffold9955.1:8756..11917 |
Genes list of scaffold | scaffold9955.1 |
Synonym | pfu_aug2.0_286.1_20561 |
Manual annotation
Study field | other |
---|---|
Gene name | hypothetical protein |
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_9955.1_46132.t1 | 1 | 1 | 7tm_2 | 341 | 580 | 3.3e-18 | 65.6 | 3.6e-22 | 5.4e-18 | 64.9 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_9955.1_46132.t1 | gi|156404556|ref|XP_001640473.1| | predicted protein [Nematostella vectensis] | 9.0e-20 |
Transcript
Transcript ID | pfu_aug1.0_9955.1_46132.t1 |
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Definition | - |
>pfu_aug1.0_9955.1_46132.t1 atgctgtcgcctgtaagcggatatgacggctttatttacatcaacttggcatgtgcaagatgtcacgagattgaggaata tagatcgtgggaaattgtgttccgggtagacgagggagagtgtaatgtcaccacaatggacgtcataacactacaagaca atcttgtggagaagcatgaacaatttacagaatacctcctcgacaaaaattgtgagtatactttttacgaatcaccgacg ctgttctctgagatcccgcgtctctgcttctgggaaacgatccatgttgaagattgtcagaactataccatgccgatgaa agatgtacaatcagcaactttgttcaagaattctgattgctgctcaaagatggctgggaattctagtgatatgaactgcg accctgtttacgatgatggtgcatgtgtctttttccaaagtaaagataagttccagtccatttaccttgagaacgtactg gctaacaagaagacgtcacttcaagccatttcactaagagttcggatacaaccggaagacgagatagattacctggtcaa accgatacctgacgtcactgagaactctgacgtcaagaaccaagagtcgtcatttttcttctactttgtcctgaggttca agatgatgttctttgcgaaagaggacgtgaatttactgatcgaatggttgggaaacatagtttttgaattcaaagaaaca attattagcgagaatatgacaacagagtgttttatctacggatcgactaagccctcagacgaatcgactcagatgtataa tgacacgcccatcatggcgctggatttgaaaagcgggtaccacaattcgtaccatgataaggttacacagagaagggatg tgccattccatatgtgcaagaaggttacattcgatatcacgataaatggaagtgacgtcacatgggcatggcattgcgat tacaaatactggtacataacgcgccgtatccctcgagattacgtagcaggccctgaagacatattgacgtacacgtgttt tactatttcgtgcatcagcttactcttgtcgttcccacttcatcgctgttcacagatgtccaagacggttcccggcaaaa acatggagaacctgatggtgacgttgttcttgtcccagatgaccttcatgtttggtattggtcaagaggagcactcactc tgtctggtggcttctattatgatacattatttctacctcagctccttctgttggatgaatctctgcatggtacatatcat gttcattctttcgaggatgaagaaatatcccaaccagagccttaactcaggcgccacctgtcggcggttcgctcccttgg tcgtcgtcggttataccttaccggcctgcattgtcgtgccatgcgtactctttgatttcgtcctcgaaacggacttcaag gtcggatacaccgaacacggaatttgttttccgtcacattatccggaaaatctgtacgtgttcgtgattccggtttgcgt ttctctggcggtgaacatactctgtctactgcgggtcatattcatcatcaatacggcagttccggatggctttgacaaca ccaagtaccgacggtacgtacccgtctacctaaagctcacaatcgtgtccggattgtcctgggtgttcggcattgtgggc gaggctacaggtaacgtatttctcaggtattgtttcatcctgtttactgggttacaggggcctgatgctctgcgtatcgt tcgtgttcagtgggagtgtgtgggcggacgtcaagtcacgtgttctctgttgctcggagccagatcccacgtccaccatc attga |
Protein
Protein ID | pfu_aug1.0_9955.1_46132.t1 |
---|---|
Definition | - |
>pfu_aug1.0_9955.1_46132.t1 MLSPVSGYDGFIYINLACARCHEIEEYRSWEIVFRVDEGECNVTTMDVITLQDNLVEKHEQFTEYLLDKNCEYTFYESPT LFSEIPRLCFWETIHVEDCQNYTMPMKDVQSATLFKNSDCCSKMAGNSSDMNCDPVYDDGACVFFQSKDKFQSIYLENVL ANKKTSLQAISLRVRIQPEDEIDYLVKPIPDVTENSDVKNQESSFFFYFVLRFKMMFFAKEDVNLLIEWLGNIVFEFKET IISENMTTECFIYGSTKPSDESTQMYNDTPIMALDLKSGYHNSYHDKVTQRRDVPFHMCKKVTFDITINGSDVTWAWHCD YKYWYITRRIPRDYVAGPEDILTYTCFTISCISLLLSFPLHRCSQMSKTVPGKNMENLMVTLFLSQMTFMFGIGQEEHSL CLVASIMIHYFYLSSFCWMNLCMVHIMFILSRMKKYPNQSLNSGATCRRFAPLVVVGYTLPACIVVPCVLFDFVLETDFK VGYTEHGICFPSHYPENLYVFVIPVCVSLAVNILCLLRVIFIINTAVPDGFDNTKYRRYVPVYLKLTIVSGLSWVFGIVG EATGNVFLRYCFILFTGLQGPDALRIVRVQWECVGGRQVTCSLLLGARSHVHHH |