Gene
| Gene Model ID | pfu_aug1.0_99708.1_35211 |
|---|---|
| Locus | scaffold99708.1 : 1 ... 1222 : + |
| To GenomeBrowser | scaffold99708.1:1..1222 |
| Genes list of scaffold | scaffold99708.1 |
| Synonym | pfu_aug2.0_857.1_24471 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_99708.1_35211.t1 | 2 | 1 | OATP | 2 | 38 | 5.1e-13 | 47.9 | 9.6e-17 | 1.4e-12 | 46.4 |
| pfu_aug1.0_99708.1_35211.t1 | 2 | 2 | OATP | 71 | 97 | 5.1e-13 | 47.9 | 0.01 | 150.0 | 0.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_99708.1_35211.t1 | gi|300794729|ref|NP_001179656.1| | solute carrier organic anion transporter family member 4A1 [Bos taurus] | 6.0e-15 |
Transcript
| Transcript ID | pfu_aug1.0_99708.1_35211.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_99708.1_35211.t1 gttctattcccggaccaattctgttcggtaaaatcattgatctcacttgcctactgtggcagaaaaagtgtacggaggat ggctcctgcttcttctacgacaataaacaaatgagttacaatttattagcagtcagtctttgtggaaaaacgttgtcctc cgtctttttcctcctggctttgttactatataaacagtcgtcatcagatatggacagcgaggagaaatcgcctgcggacg ataaaaatacgaataaactatcgataaagaacaatacaaacagtgtagatacattgacgacatctgtgaacgatgaaatc ttcatgaccaatagtcgtggagacgtaaacgataaccgtccgaatcctctcgtcaaaaacgatgtaaatggtgatgtaga ttccaaaaataattactctgagtccaagtatataaaagacgatggtgaatatgtaacagagatgtga |
|
Protein
| Protein ID | pfu_aug1.0_99708.1_35211.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_99708.1_35211.t1 SIPGPILFGKIIDLTCLLWQKKCTEDGSCFFYDNKQMSYNLLAVSLCGKTLSSVFFLLALLLYKQSSSDMDSEEKSPADD KNTNKLSIKNNTNSVDTLTTSVNDEIFMTNSRGDVNDNRPNPLVKNDVNGDVDSKNNYSESKYIKDDGEYVTEM |
|