Gene
| Gene Model ID | pfu_aug1.0_99757.1_28089 |
|---|---|
| Locus | scaffold99757.1 : 39 ... 1503 : + |
| To GenomeBrowser | scaffold99757.1:39..1503 |
| Genes list of scaffold | scaffold99757.1 |
| Synonym | pfu_aug2.0_107.1_23464 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_99757.1_28089.t1 | 1 | 1 | Tctex-1 | 94 | 194 | 1.6e-22 | 79.2 | 1.6e-26 | 2.4e-22 | 78.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_99757.1_28089.t1 | gi|156393569|ref|XP_001636400.1| | predicted protein [Nematostella vectensis] | 8.0e-24 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_99757.1_28089.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_99757.1_28089.t1 atgatgaatgacgccaccgcaaagacggacggcgctcccaatcggcgcaagtctatctacccagtaggagacaggaaaca gtcactggaaccccctcacggaggggcaagacgaccatccatggacgcccgcagaccctcacagtcggaccggaaacagt ccatcgtggaatcgaacgccggaaggtcaaccctcatcatgacgtcagcaacgacgcaaagaccgaacgtcaagtacgaa aatacctacaaactagaacctgacaaaaagtacaaaagtgacgaggtcaaaagaactataaaggaagtattagaaaagga attagacggtgttaaatatgacaaagataagtgtaccggacttacaaagacgatagcagaaagcataaaacgtcaagtta aggttttaggctttgtccgttacaagttggtcgtggtagtggccattggtcaacaggaagacgcccatccctcagtggct tttaccagtaggtgtatatggaacgaacaaatggacaacttctccgagtatatttacaaaagtccttctctatttgccgt aggactagtctacgctatgtcatttgattga |
|
Protein
| Protein ID | pfu_aug1.0_99757.1_28089.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_99757.1_28089.t1 MMNDATAKTDGAPNRRKSIYPVGDRKQSLEPPHGGARRPSMDARRPSQSDRKQSIVESNAGRSTLIMTSATTQRPNVKYE NTYKLEPDKKYKSDEVKRTIKEVLEKELDGVKYDKDKCTGLTKTIAESIKRQVKVLGFVRYKLVVVVAIGQQEDAHPSVA FTSRCIWNEQMDNFSEYIYKSPSLFAVGLVYAMSFD |
|