Gene
| Gene Model ID | pfu_aug1.0_9984.1_53453 |
|---|---|
| Locus | scaffold9984.1 : 16947 ... 21255 : - |
| To GenomeBrowser | scaffold9984.1:16947..21255 |
| Genes list of scaffold | scaffold9984.1 |
| Synonym | pfu_aug2.0_154.1_13688 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_9984.1_53453.t1 | 4 | 1 | LRR_8 | 8 | 53 | 2.7e-23 | 81.4 | 6.2e-09 | 9.2e-06 | 25.3 |
| pfu_aug1.0_9984.1_53453.t1 | 4 | 1 | LRR_4 | 17 | 57 | 1.3e-18 | 66.1 | 8.8e-06 | 0.013 | 15.1 |
| pfu_aug1.0_9984.1_53453.t1 | 5 | 1 | LRR_7 | 17 | 31 | 6.3e-07 | 28.5 | 0.0017 | 2.6 | 8.6 |
| pfu_aug1.0_9984.1_53453.t1 | 7 | 1 | LRR_1 | 18 | 39 | 3.9e-13 | 47.4 | 0.0012 | 1.7 | 8.9 |
| pfu_aug1.0_9984.1_53453.t1 | 7 | 2 | LRR_1 | 43 | 59 | 3.9e-13 | 47.4 | 0.13 | 200.0 | 2.6 |
| pfu_aug1.0_9984.1_53453.t1 | 4 | 2 | LRR_8 | 162 | 173 | 2.7e-23 | 81.4 | 0.031 | 46.0 | 3.8 |
| pfu_aug1.0_9984.1_53453.t1 | 4 | 2 | LRR_4 | 162 | 173 | 1.3e-18 | 66.1 | 0.016 | 23.0 | 4.7 |
| pfu_aug1.0_9984.1_53453.t1 | 7 | 3 | LRR_1 | 162 | 174 | 3.9e-13 | 47.4 | 0.0021 | 3.1 | 8.1 |
| pfu_aug1.0_9984.1_53453.t1 | 5 | 2 | LRR_7 | 162 | 173 | 6.3e-07 | 28.5 | 0.0091 | 13.0 | 6.4 |
| pfu_aug1.0_9984.1_53453.t1 | 4 | 3 | LRR_8 | 186 | 243 | 2.7e-23 | 81.4 | 3.1e-13 | 4.6e-10 | 39.1 |
| pfu_aug1.0_9984.1_53453.t1 | 4 | 3 | LRR_4 | 186 | 223 | 1.3e-18 | 66.1 | 2.6e-07 | 0.00039 | 19.9 |
| pfu_aug1.0_9984.1_53453.t1 | 7 | 4 | LRR_1 | 186 | 205 | 3.9e-13 | 47.4 | 0.037 | 55.0 | 4.3 |
| pfu_aug1.0_9984.1_53453.t1 | 7 | 5 | LRR_1 | 208 | 229 | 3.9e-13 | 47.4 | 0.0043 | 6.3 | 7.2 |
| pfu_aug1.0_9984.1_53453.t1 | 5 | 3 | LRR_7 | 208 | 222 | 6.3e-07 | 28.5 | 0.032 | 47.0 | 4.8 |
| pfu_aug1.0_9984.1_53453.t1 | 5 | 4 | LRR_7 | 232 | 245 | 6.3e-07 | 28.5 | 0.0094 | 14.0 | 6.4 |
| pfu_aug1.0_9984.1_53453.t1 | 4 | 4 | LRR_8 | 233 | 284 | 2.7e-23 | 81.4 | 9.4e-11 | 1.4e-07 | 31.1 |
| pfu_aug1.0_9984.1_53453.t1 | 4 | 4 | LRR_4 | 233 | 269 | 1.3e-18 | 66.1 | 1.0e-08 | 1.5e-05 | 24.5 |
| pfu_aug1.0_9984.1_53453.t1 | 7 | 6 | LRR_1 | 233 | 249 | 3.9e-13 | 47.4 | 0.0091 | 13.0 | 6.2 |
| pfu_aug1.0_9984.1_53453.t1 | 7 | 7 | LRR_1 | 256 | 275 | 3.9e-13 | 47.4 | 0.0025 | 3.7 | 7.9 |
| pfu_aug1.0_9984.1_53453.t1 | 5 | 5 | LRR_7 | 256 | 269 | 6.3e-07 | 28.5 | 0.048 | 72.0 | 4.2 |
| pfu_aug1.0_9984.1_53453.t1 | 1 | 1 | TIR | 401 | 520 | 4.0e-10 | 39.2 | 5.6e-13 | 8.3e-10 | 38.2 |
| pfu_aug1.0_9984.1_53453.t1 | 1 | 1 | TIR_2 | 401 | 501 | 9.8e-06 | 25.6 | 1.4e-08 | 2.1e-05 | 24.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_9984.1_53453.t1 | gi|242006518|ref|XP_002424097.1| | toll, putative [Pediculus humanus corporis] | 3.0e-36 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| 8-16cell | 1 |
| trochophore | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_9984.1_53453.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_9984.1_53453.t1 atgacgtccgtccatgatcttctgccgaatggcgtcactatgaacaacaccaagttgatgaatttggacctcagtaattg tggaatagaattcattggaaaggatgtcttcgatggattttcgggcatcaagtatgtaaacatgtcgcacaacaaaataa gaatgtttcaaccattccaaactcaatcaagagcagtatttaacgttttggagaatccgttagcatgtgaatgcaatatg aaatggctgaagaccatgccagaaaaactccgaagctataaattaccaaaatgcatagtgtatccgctcaacaaaacgag aaatgtgcgagacgttctgaaaggcgactttctttgttcacaaacagacgcctgtccttctgtctgtcggtgctactcca gtgaaccaatgggagatatcgtaacagcagagtgttcgtcaaaactagaggctgttccttccactataccaaataccact gtcactctttatctatcgggtaataatcttaccacgctacgattctcgacaaaggaagtctcttactttaatacagaagt actatatctgaataatagtcggattaagtacgtggaaagcaatttctttacacatttttcgaagcttaagaagctgatgt tggagcacaacgaccttacaaacattgcttcggacacattctctcctctgctgtatttggaggaattgtcgttacaccat aaccgattggctaaattaagagctgacgttatacatgatctgaaatctttgaaaatgttggatttaaggaataatagtat gaaatatttggaggaagacattttggaagaaatcgattctcttaaatattttaaacgtatttatctaggagaaaacgctt ggagatgcaattgcaagaacgcagatttccggaaatggattgacagtaagaaatttattatttatgacagaaataatata aaatgcgggaaaagcatgatgagatacgtggacgaagaccgatttgtttgcgaaactgaaacttctgttagtcatctgga ccggaaatcattgattatttcctgtgttgtcgtcatcgtggtttttgctatcctattgacggcattattgtactatagac gcgatattttggcagcgctttacacgcggttccgttggggatgcttccggccgagctatactgacggtaagatgtatgac gtatttctgatgtacgataataacgacgctaaaagttcggagtgggtggaggatcaccttcttccgcgcctgcagagaaa tcagtcctaccgtgtcatcataccaaaccccgccaacccgcgcgcgagcgacgaagaggaggaacttaaacagatatatg actgtaaatgtgccgtcttcgttttatccaagtatgtaactagcaaccaattttgtaatgattgtttcgagcgagcttcc agactttcaaaatcacaagaagacttcaacctaattttactcgttcttggtgacattgacatggctttactagaccccga gatgaggaaaatattaacctccggaaattacatcacaattagatcgagatccgtgtgggatagactgttttacgaattac caaatccgagaactacttcaggtcccttccgagaagaagacgaagtttctgaatctgacgtcataatctattctccccct tccacacgacctagtaatgattatgggacagtgctgattcagtaa |
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Protein
| Protein ID | pfu_aug1.0_9984.1_53453.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_9984.1_53453.t1 MTSVHDLLPNGVTMNNTKLMNLDLSNCGIEFIGKDVFDGFSGIKYVNMSHNKIRMFQPFQTQSRAVFNVLENPLACECNM KWLKTMPEKLRSYKLPKCIVYPLNKTRNVRDVLKGDFLCSQTDACPSVCRCYSSEPMGDIVTAECSSKLEAVPSTIPNTT VTLYLSGNNLTTLRFSTKEVSYFNTEVLYLNNSRIKYVESNFFTHFSKLKKLMLEHNDLTNIASDTFSPLLYLEELSLHH NRLAKLRADVIHDLKSLKMLDLRNNSMKYLEEDILEEIDSLKYFKRIYLGENAWRCNCKNADFRKWIDSKKFIIYDRNNI KCGKSMMRYVDEDRFVCETETSVSHLDRKSLIISCVVVIVVFAILLTALLYYRRDILAALYTRFRWGCFRPSYTDGKMYD VFLMYDNNDAKSSEWVEDHLLPRLQRNQSYRVIIPNPANPRASDEEEELKQIYDCKCAVFVLSKYVTSNQFCNDCFERAS RLSKSQEDFNLILLVLGDIDMALLDPEMRKILTSGNYITIRSRSVWDRLFYELPNPRTTSGPFREEDEVSESDVIIYSPP STRPSNDYGTVLIQ |
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