Gene
| Gene Model ID | pfu_aug1.0_9985.1_17556 |
|---|---|
| Locus | scaffold9985.1 : 1526 ... 15169 : + |
| To GenomeBrowser | scaffold9985.1:1526..15169 |
| Genes list of scaffold | scaffold9985.1 |
| Synonym | pfu_aug2.0_49.1_30073 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_9985.1_17556.t1 | 1 | 1 | Arb2 | 16 | 166 | 2.7e-29 | 101.8 | 2.2e-32 | 4.7e-29 | 101.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_9985.1_17556.t1 | gi|241574826|ref|XP_002403141.1| | conserved hypothetical protein [Ixodes scapularis] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| maleGonad | 1 |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_9985.1_17556.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_9985.1_17556.t1 atgtcagaaaaggagcctgaagagggaaaacttagaaacataaagacagaggagaaattcttgtttaatgtgaaagaagg agaccatcgttataatcagaaacattatgaggctttgggaaatataataacggagcacatttataagctgttagaggaaa gatacaaactcaggaagataactttaccagtagatgcttctgatgatgaaccaacaacatttttctatgcctctgatgat gccctaaccaacccagacaagcttttggtgctgatacacgggtcaggagcagtaagggcgggacagtgggctaggagctt aatcatcaatgattgcttggactccggcacacagtttccttacatcaaatggggcatagaaaacaactatggcattattg tagcaaatacaaacataaatgaagcaacagtaaacggtcaagaagttgaaataaggggtagtaagtcaccagagatgcac acagaaagtatatggaagggattcgttcaaaatgccaaggcaaaacaaattgccatagtggcccatagctatggaggagt ctgtacattagagctggctatcaagtttacaaatgagtttaaagatcgtgtctttgctgttgcactgactgactcagtac atagccttggtcatcaggaagcctctgaagaagttatagagtactacaaggagagagctaagaactgggcatcatcatat gaccccctggacacaccactggaaaccagattggacagttgtcctacagtgtcagctggtacagacaaacatgaatacac aagttttagctgtatgcattctgtgttcaagttctttgaagaaaaatactgtgagagaaatagttcccaattatctgtta agaaagaatctattaaaagtgactctagatcagcagacggagaaaagtcatctgaaaacgctaaggcagctggacctaag gtagacaagggtgataactctgtgatgtcacaggatgtactgagtcaggatgatattaacatggcgtctcagtcacaaga catgcttagccagggagacacagatatggcatctcagtcacaagacatgcttagtcaagaagacatggggtctcagtctc agggagacacagatatggcatctcagggagacacacacattccatctcgagatgtcaccagtgtgaagaaagaagaactc tga |
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Protein
| Protein ID | pfu_aug1.0_9985.1_17556.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_9985.1_17556.t1 MSEKEPEEGKLRNIKTEEKFLFNVKEGDHRYNQKHYEALGNIITEHIYKLLEERYKLRKITLPVDASDDEPTTFFYASDD ALTNPDKLLVLIHGSGAVRAGQWARSLIINDCLDSGTQFPYIKWGIENNYGIIVANTNINEATVNGQEVEIRGSKSPEMH TESIWKGFVQNAKAKQIAIVAHSYGGVCTLELAIKFTNEFKDRVFAVALTDSVHSLGHQEASEEVIEYYKERAKNWASSY DPLDTPLETRLDSCPTVSAGTDKHEYTSFSCMHSVFKFFEEKYCERNSSQLSVKKESIKSDSRSADGEKSSENAKAAGPK VDKGDNSVMSQDVLSQDDINMASQSQDMLSQGDTDMASQSQDMLSQEDMGSQSQGDTDMASQGDTHIPSRDVTSVKKEEL |
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