Gene
| Gene Model ID | pfu_aug1.0_9985.1_17557 |
|---|---|
| Locus | scaffold9985.1 : 15396 ... 49427 : + |
| To GenomeBrowser | scaffold9985.1:15396..49427 |
| Genes list of scaffold | scaffold9985.1 |
| Synonym | pfu_aug2.0_49.1_30074 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_9985.1_17557.t1 | 1 | 1 | Arrestin_N | 7 | 157 | 0.0 | 156.6 | 0.0 | 0.0 | 156.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_9985.1_17557.t1 | gi|261289371|ref|XP_002603129.1| | hypothetical protein BRAFLDRAFT_199194 [Branchiostoma floridae] | 1.4013e-45 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| maleGonad | 1 |
Transcript
| Transcript ID | pfu_aug1.0_9985.1_17557.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_9985.1_17557.t1 atggggaagctgagagtgtttgacattgttctagacaatcatcagggagtatactttgctgggcagcatgtaaacggcag ggtcattgtggagcttgatgctccaatgaagatgagagaaatacggttgacattcaaaggtttggcttatgttcattgga ccgagtcccatagtactggatcagggaaaaataggcgtacccacactcgacactactctgcaacagaaacatattttcac caaaaagtaccagtctatggcttaggtatgggaagtggagaaaataacaatcttccacaaggacagcatgcttttccatt cagctttattctcccaccatctctaccatcatcatttgagggaacttggggttatgtgcgctacaccatcaaagcaacca tagacaaaccctggaagtttgatcatgatacaaaacgtccattcacagtggttgctttactagatctgaatctacaacca aatgccatggatatttatagccttatggatgtaataaataatgatttttacctcagtactaacagtcccctgattggact gaggatcaaggataatgggagtgatcatcctctataa |
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Protein
| Protein ID | pfu_aug1.0_9985.1_17557.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_9985.1_17557.t1 MGKLRVFDIVLDNHQGVYFAGQHVNGRVIVELDAPMKMREIRLTFKGLAYVHWTESHSTGSGKNRRTHTRHYSATETYFH QKVPVYGLGMGSGENNNLPQGQHAFPFSFILPPSLPSSFEGTWGYVRYTIKATIDKPWKFDHDTKRPFTVVALLDLNLQP NAMDIYSLMDVINNDFYLSTNSPLIGLRIKDNGSDHPL |
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