Gene
| Gene Model ID | pfu_aug1.0_9985.1_17558 |
|---|---|
| Locus | scaffold9985.1 : 54686 ... 78078 : + |
| To GenomeBrowser | scaffold9985.1:54686..78078 |
| Genes list of scaffold | scaffold9985.1 |
| Synonym | pfu_aug2.0_22203.1_13276 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_9985.1_17558.t1 | 2 | 1 | Arrestin_N | 4 | 68 | 1.0e-23 | 83.8 | 3.0e-27 | 2.2e-23 | 82.7 |
| pfu_aug1.0_9985.1_17558.t1 | 2 | 2 | Arrestin_N | 125 | 132 | 1.0e-23 | 83.8 | 0.38 | 2800.0 | -2.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_9985.1_17558.t1 | gi|307206075|gb|EFN84168.1| | 1.0e-20 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 41 |
| egg-4cell | 5 |
| 8-16cell | 20 |
| egg-Dshape | 9 |
| trochophore | 4 |
| >Adult tissues | |
| Dshape | 15 |
| adductorMuscle | 3 |
| maleGonad | 6 |
| mantle | 18 |
| mantleEdge | 3 |
| mantlePallium | 5 |
| pearlSac | 5 |
Transcript
| Transcript ID | pfu_aug1.0_9985.1_17558.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_9985.1_17558.t1 atgggcagtgggggaaataaccatcttcaacaaggacagcatgcatttccattcagctttattctcccaccttcgttacc atcatcatttgagggaggtgtgggttatgtgcggtacaccattaaagcaaccatagacaaaccgtggaagtttgatcata atgtgaaacgtccattcacagtggtggctttactagatctgaatctacaaccaaatgccatggaaggtcttgtcacaagg aatacacatgtgaaatatcaaagccctatcacttaccaatcaaaagttatgggctgtgacacccaaagtgtgacagacag acagacagacggacggacggacggacggaaggacggacagacggacggacggacggacggacggacggacagacggacaa cggacaaagtgatccctaagtgtcgctatgcttcgcaggcgacacaaaaactaaatgctaactttaaacactggtatgaa tga |
|
Protein
| Protein ID | pfu_aug1.0_9985.1_17558.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_9985.1_17558.t1 MGSGGNNHLQQGQHAFPFSFILPPSLPSSFEGGVGYVRYTIKATIDKPWKFDHNVKRPFTVVALLDLNLQPNAMEGLVTR NTHVKYQSPITYQSKVMGCDTQSVTDRQTDGRTDGRKDGQTDGRTDGRTDRRTTDKVIPKCRYASQATQKLNANFKHWYE |
|