Gene
Gene Model ID | pfu_aug1.0_9985.1_17558 |
---|---|
Locus | scaffold9985.1 : 54686 ... 78078 : + |
To GenomeBrowser | scaffold9985.1:54686..78078 |
Genes list of scaffold | scaffold9985.1 |
Synonym | pfu_aug2.0_22203.1_13276 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_9985.1_17558.t1 | 2 | 1 | Arrestin_N | 4 | 68 | 1.0e-23 | 83.8 | 3.0e-27 | 2.2e-23 | 82.7 |
pfu_aug1.0_9985.1_17558.t1 | 2 | 2 | Arrestin_N | 125 | 132 | 1.0e-23 | 83.8 | 0.38 | 2800.0 | -2.0 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_9985.1_17558.t1 | gi|307206075|gb|EFN84168.1| | 1.0e-20 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)Libraries | EST count |
---|---|
>Embryonic/Larval stages | |
mix | 41 |
egg-4cell | 5 |
8-16cell | 20 |
egg-Dshape | 9 |
trochophore | 4 |
>Adult tissues | |
Dshape | 15 |
adductorMuscle | 3 |
maleGonad | 6 |
mantle | 18 |
mantleEdge | 3 |
mantlePallium | 5 |
pearlSac | 5 |
Transcript
Transcript ID | pfu_aug1.0_9985.1_17558.t1 |
---|---|
Definition | - |
>pfu_aug1.0_9985.1_17558.t1 atgggcagtgggggaaataaccatcttcaacaaggacagcatgcatttccattcagctttattctcccaccttcgttacc atcatcatttgagggaggtgtgggttatgtgcggtacaccattaaagcaaccatagacaaaccgtggaagtttgatcata atgtgaaacgtccattcacagtggtggctttactagatctgaatctacaaccaaatgccatggaaggtcttgtcacaagg aatacacatgtgaaatatcaaagccctatcacttaccaatcaaaagttatgggctgtgacacccaaagtgtgacagacag acagacagacggacggacggacggacggaaggacggacagacggacggacggacggacggacggacggacagacggacaa cggacaaagtgatccctaagtgtcgctatgcttcgcaggcgacacaaaaactaaatgctaactttaaacactggtatgaa tga |
Protein
Protein ID | pfu_aug1.0_9985.1_17558.t1 |
---|---|
Definition | - |
>pfu_aug1.0_9985.1_17558.t1 MGSGGNNHLQQGQHAFPFSFILPPSLPSSFEGGVGYVRYTIKATIDKPWKFDHNVKRPFTVVALLDLNLQPNAMEGLVTR NTHVKYQSPITYQSKVMGCDTQSVTDRQTDGRTDGRKDGQTDGRTDGRTDRRTTDKVIPKCRYASQATQKLNANFKHWYE |