Gene
| Gene Model ID | pfu_aug1.0_9992.1_60716 |
|---|---|
| Locus | scaffold9992.1 : 8976 ... 18421 : + |
| To GenomeBrowser | scaffold9992.1:8976..18421 |
| Genes list of scaffold | scaffold9992.1 |
| Synonym | pfu_aug2.0_3490.1_02416 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_9992.1_60716.t1 | 2 | 1 | Rab3-GTPase_cat | 20 | 49 | 0.0 | 211.0 | 0.17 | 2500.0 | -2.3 |
| pfu_aug1.0_9992.1_60716.t1 | 2 | 2 | Rab3-GTPase_cat | 141 | 307 | 0.0 | 211.0 | 0.0 | 0.0 | 209.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_9992.1_60716.t1 | gi|291229416|ref|XP_002734671.1| | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_9992.1_60716.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_9992.1_60716.t1 atgttgaattgctgtatagagagaaaaataaaacgggaacagatttacaaagggtacacaggagaatccttggaaacacc tgacagtgattctggttgcctagcaactgataaacagttagccaatcacaataaaatgtccaaaagtgatagcttgacta cttctttttcaaaggaaaacttaaagtgcaatagtgataattcagaacagcaaaaccgggatgcaaaacataactgtgat tctctgacagaggaacttccagctaaaattgttcacctggatagttcaagtgaagatgaggaattttttgagtgtgatga ggagagtatggatgaagattctagtagatcaaataacaaacagctcacacatatagacagtgttgatacgacgtcaagtt ccgaagctccgttccacgatagcgttacgcataaacctgaggggcggcagtgtcgtcatggtgatcttctcctcctacat gtggacgagccgttatatatacccctgactcaggaaccgtcacccatgacagaagatatgctggaggaacatgcagaggt tctagctaagctgggtacttcatcagagggagcccagctcagagccaggatgcagagtgcttgtctggtatcggatatgg aatcatttaaggctgccaacccaggttgtgttctagaggattttgttagatggtattcacccagagactggattgtagat gacgatgatgttatagatgataatgtcgatgacaataaggatgatcctaagcaaataaaaggtcatctgagctcacgtat gcagattcctggtaacgtgtgggtggaggcgtggaatggagcacggcccgtaccggcacgaaggcaaaaacggctctttg acgatacaaaagaggctgagaaggtccttcatttcctagcttccatgaaaccaggtgacgtcatcagaaatttactgtct gtattggttcactcggctattataaccatagtagagaatgaacactcggacatacccaaacttacagaaatggtacagca actggttaccatggcgagtaaagtcacacggacacctcatcaagatataaaaagatacgaggatttaattcgacggatag catttgtggaaaccctaatcgcacgagctcggtcactgaaggataaatttaccactgatctcatagaccgtccggactgt cttgacgagatgcagaagtttgtatgtgacatgctacattacccagaagtctctgtgaggggtgggcccagtggaccggc cgggtccgttatacataaactgtttgtagcggcacagaagaacagagaggatgtgatctaa |
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Protein
| Protein ID | pfu_aug1.0_9992.1_60716.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_9992.1_60716.t1 MLNCCIERKIKREQIYKGYTGESLETPDSDSGCLATDKQLANHNKMSKSDSLTTSFSKENLKCNSDNSEQQNRDAKHNCD SLTEELPAKIVHLDSSSEDEEFFECDEESMDEDSSRSNNKQLTHIDSVDTTSSSEAPFHDSVTHKPEGRQCRHGDLLLLH VDEPLYIPLTQEPSPMTEDMLEEHAEVLAKLGTSSEGAQLRARMQSACLVSDMESFKAANPGCVLEDFVRWYSPRDWIVD DDDVIDDNVDDNKDDPKQIKGHLSSRMQIPGNVWVEAWNGARPVPARRQKRLFDDTKEAEKVLHFLASMKPGDVIRNLLS VLVHSAIITIVENEHSDIPKLTEMVQQLVTMASKVTRTPHQDIKRYEDLIRRIAFVETLIARARSLKDKFTTDLIDRPDC LDEMQKFVCDMLHYPEVSVRGGPSGPAGSVIHKLFVAAQKNREDVI |
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