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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.1_5652.1_80179
Locus scaffold5652.1 : 1551 ... 10512 : -
To GenomeBrowser scaffold5652.1:1551..10512
Genes list of scaffold scaffold5652.1
Synonym NA

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.1_5652.1_80179.t1 1 1 Homeobox 196 247 4.6e-19 67.7 6.2e-23 4.6e-19 67.7

Transcript
Transcript IDpfu_aug1.1_5652.1_80179.t1
Definition-
>pfu_aug1.1_5652.1_80179.t1
atgaactcgtactatcccgcgtctttttttgctcagtattccacagaaaattcacatataccgcataatgtgtcgtataa
ttctaacaattttggattactaagtcgttttgccgaccatattagtgcttaccatcataataacagctttaccggtgacc
atcatcagagattatctaacggattctcttctcatcatcaggacacttcacaattcatatctagggacaataataactcc
acaaaccatggacggatgcagaattatccgcaaccagcgccagcacatcagggtgaggatagcagcgccgtttcccgacc
ctacaactcatgtagcccggacagttggagtcccccaccccatggggtaccctcggggtcgccagactcaggtcaccacc
aaagtaccagcccctaccccacgggcatggaaaattctaacaccccgtgtaacatgatgcttcaaaaacacatgaaaagc
gaccacggttcacagtctcccactacagacccagccacgcccttttacccttggatggggatcgtgggtaagtacagaat
gagtaaatgttattatttacaatccacgtacagccggtatcaaacgttggaactcgagaaagaattccagttcaatcact
accttacacggaaacggaggatagaagtcgcgcatgcgctgtgcttgactgagagacaaattaaaatctggtttcagaat
cgtcgtatgaaacttaagaaggagcggcaggcgataaaggactta

Protein
Protein IDpfu_aug1.1_5652.1_80179.t1
Definition-
>pfu_aug1.1_5652.1_80179.t1
MNSYYPASFFAQYSTENSHIPHNVSYNSNNFGLLSRFADHISAYHHNNSFTGDHHQRLSNGFSSHHQDTSQFISRDNNNS
TNHGRMQNYPQPAPAHQGEDSSAVSRPYNSCSPDSWSPPPHGVPSGSPDSGHHQSTSPYPTGMENSNTPCNMMLQKHMKS
DHGSQSPTTDPATPFYPWMGIVGKYRMSKCYYLQSTYSRYQTLELEKEFQFNHYLTRKRRIEVAHALCLTERQIKIWFQN
RRMKLKKERQAIKDL

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