Gene
Gene Model ID | pfu_aug1.1_6509.1_80030 |
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Locus | scaffold6509.1 : 20403 ... 35160 : + |
To GenomeBrowser | scaffold6509.1:20403..35160 |
Genes list of scaffold | scaffold6509.1 |
Synonym | NA |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.1_6509.1_80030.t1 | 2 | 1 | Tropomyosin | 1 | 81 | 0.0 | 235.4 | 2.4e-33 | 1.0e-30 | 106.6 |
pfu_aug1.1_6509.1_80030.t1 | 2 | 1 | Tropomyosin_1 | 3 | 69 | 5.7e-24 | 84.5 | 1.1e-21 | 4.5e-19 | 68.7 |
pfu_aug1.1_6509.1_80030.t1 | 2 | 2 | Tropomyosin_1 | 78 | 170 | 5.7e-24 | 84.5 | 2.6e-07 | 0.00011 | 22.0 |
pfu_aug1.1_6509.1_80030.t1 | 2 | 2 | Tropomyosin | 81 | 177 | 0.0 | 235.4 | 1.99965e-42 | 8.20001e-40 | 136.3 |
Transcript
Transcript ID | pfu_aug1.1_6509.1_80030.t1 |
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Definition | - |
>pfu_aug1.1_6509.1_80030.t1 gttcaaggtttgaacaggaggatacagctgttagaggaagacttagaaagatctgaagaaagattacagtctgccacaga aaaattagaggaggcttctaaagctgcagatgagagtgaaaggagaggacgtaaagttttagagagtagaaatgtctctg atgatgagagaatagatgccctggaacagcaactgaaagaagctaaatatgttgccgaggatgcagatagaaaatatgat gagagaaaccgcaaggtcttggaaaacctgaacaatgcatcagaggagaggtcagacgtgctggagaaacagttatctga ggccaaatggatcgcagaggaagcagacaaaaaatatgatgaggaggcagcacgtaaacttgctatcacagaggttgacc ttgagcgtgccgaagctcgtttggaggcagctgaggcaaaattattaaccttgaagaagagctgacagttgtgggtgcca atatcaaaaccctacaggtccaaaatgaccaggcctcacagcgggaggacagctacgaggagaccattcgtgaccttaca cagcggctgaaggatgctgaaaaccgtgccactgaagctgaaaggacagtatccaaattgcagaaagaagtcgacaggtt ggaagatgaattgctttcggagaaggagagatacaaagcgattagtgacgagttggatcagacctttgccgagcttgcag gatactaatcacttccattgtcgtgccctcactgttaataactctctcggtcggcatcaaattgccattatttcatcaaa atttaggacaaaaggatgtaatggtttatcattttatgaaaacattaataattcatccatgaaatgtttgtgaatgagga caaaaattgatagaaaattttagaatcataacaacctatcctttcaaagattatgtctgacatgattgacaaaagggtga atttttcattctttttctttttcctgaacaaaacttttctttctctccatgtcaactgtctttattatttatgtttttcg tttctgttaaaactttgtgaggttactaagataaatttatttgttcatattttatatatttctatatatatatatttatg aatgtttgttatagatgttgtaagattcatttttcgaatcggcagttgggctgccagacctagggaagatcagaacgagg ctcggaaggtatatgtgatctctccttacttgtcattttaggcggtgtagtaacctcatggggttttgacgaaaaaaatt acaaaaccgcaatctcaaaggagtatgccaagtcaggtgtggaaatttaagatgcattcgaaatggttagggaaaatcgc gaaaaaatctatactgctgagtaaataacgaataagaccaatacacatccatcgtcaaaatatgcatagaaaaagaccat ccatggcaatatccagttccgctgttttgattgtagtaaatttccactcctgtctttgctgtctttattattatatttgt ccagataataaataatgataataattgatgtatgtaattaatacatgggaatgatttaatgtgcatgattattgtgtata gaggatgatatatcctggtcatgtagatgattatgcagtaatgatgatccaatccagaacatattttttcttacacaaat aatagatttttataaattattttcctttcttctatgctttagatatgtttttctcaatacaataaacattttattgtaa |
Protein
Protein ID | pfu_aug1.1_6509.1_80030.t1 |
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Definition | - |
>pfu_aug1.1_6509.1_80030.t1 VQGLNRRIQLLEEDLERSEERLQSATEKLEEASKAADESERRGRKVLESRNVSDDERIDALEQQLKEAKYVAEDADRKYD EKIINLEEELTVVGANIKTLQVQNDQASQREDSYEETIRDLTQRLKDAENRATEAERTVSKLQKEVDRLEDELLSEKERY KAISDELDQTFAELAGY |