Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.1_678.1_80090
Locus scaffold678.1 : 56933 ... 57410 : -
To GenomeBrowser scaffold678.1:56933..57410
Genes list of scaffold scaffold678.1
Synonym NA

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.1_678.1_80090.t1 1 1 C1q 25 151 1.1e-21 77.1 1.8e-25 1.3e-21 76.8

Transcript
Transcript IDpfu_aug1.1_678.1_80090.t1
Definition-
>pfu_aug1.1_678.1_80090.t1
agtttacttccaagcttggaattctgcaactatgaagaacatcaaaagtggtcatgtcttcgtcttcgatagaacaaaca
caaatcatggaaatcactatgacagttccaaggggaactttaaagctcctagagacggcccgtacgtctttacatggact
gtcgttacccaggaccaatacagtataaatgttgaactgttcaggaataacaaaagagtaagtcttgcacaagcagatgg
tcagcccggaccacaaaatagttccggatccaacacggttgtgctggatcttaagacaggtgacgtggtggatcttagat
gtggtgattggatgaaccaggatcagcgacagcttgttggcgatacacactctacattttccggatgggcactatgattg
aacactaccaatcccttttaagttggaagatacgcttataaaattaaaaaagcattgaataaaagcatattcttcttt

Protein
Protein IDpfu_aug1.1_678.1_80090.t1
Definition-
>pfu_aug1.1_678.1_80090.t1
LIFFVCYIVISGRLMDSFYYHLVYFQAWNSATMKNIKSGHVFVFDRTNTNHGNHYDSSKGNFKAPRDGPYVFTWTVVTQD
QYSINVELFRNNKRVSLAQADGQPGPQNSSGSNTVVLDLKTGDVVDLRCGDWMNQDQRQLVGDTHSTFSGWAL

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