Gene
| Gene Model ID | pfu_aug1.1_8205.1_80044 |
|---|---|
| Locus | scaffold8205.1 : 45339 ... 46752 : - |
| To GenomeBrowser | scaffold8205.1:45339..46752 |
| Genes list of scaffold | scaffold8205.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.1_8205.1_80044.t1 | 6 | 1 | Calponin | 27 | 52 | 0.0 | 159.1 | 6.1e-12 | 3.0e-08 | 32.8 |
| pfu_aug1.1_8205.1_80044.t1 | 6 | 2 | Calponin | 68 | 92 | 0.0 | 159.1 | 4.9e-15 | 2.4e-11 | 42.7 |
| pfu_aug1.1_8205.1_80044.t1 | 6 | 3 | Calponin | 108 | 133 | 0.0 | 159.1 | 3.8e-12 | 1.9e-08 | 33.5 |
| pfu_aug1.1_8205.1_80044.t1 | 6 | 4 | Calponin | 149 | 173 | 0.0 | 159.1 | 3.5e-14 | 1.7e-10 | 40.0 |
| pfu_aug1.1_8205.1_80044.t1 | 6 | 5 | Calponin | 190 | 212 | 0.0 | 159.1 | 3.6e-11 | 1.8e-07 | 30.3 |
| pfu_aug1.1_8205.1_80044.t1 | 6 | 6 | Calponin | 228 | 232 | 0.0 | 159.1 | 0.36 | 1800.0 | -1.7 |
Transcript
| Transcript ID | pfu_aug1.1_8205.1_80044.t1 |
|---|---|
| Definition | - |
>pfu_aug1.1_8205.1_80044.t1 tccaacatgtggatcgaaaccagtagaaaaacaccaagtccagttcagttacgagcaacttaaaaattcccatggtgtta ttggtttacagtcgggaaccaacaaatttgcatctcaaaagggcatgcgcggaggttttggtgcagtacgtcacatttct gacatcagggcagatgacctttccagagatggtcaagataacataggtcttcaagctggatcaaacaagtttgccagtca gaagggaatgacgggattcggcgctgtccgccatattgctgacatcagagcagacgattataacaaggagtcgtcaacgg acatcagtttacagtccggtaccaacaaattcgcctcccagaaaggaatgcgtggtggattcggcgccgtccgccatatt tcggatatccgcgcagatcagtattcggaagaaggaaagagctttatcaacttacaagccggaagcaaccagtttgcatc gcagaagggtatgacaggtttcggagctgtgcgtcacattgctgatatcagggccgatgatttagatagagaagctgcct ccaccgtcagtctgcaatatggaaccaaccaattcgacagccaggcaggcatgagaggttttggcgcgcaacgtcacgtg tctgatatcaaagtcaatgatcttgctgaacagctcagaatgcagcaaatgggagtaacacctcaacagtacacacagat caagagggaagaagaagaagcagagaatgatatgtaggccaactttggacaacatctgactctatctgttcactttgctt atagaaacatctgaacttgaaacaaacgaacaatcaagacgctgtaagatcaaagatacgaaacaaagaaaaccatggtg atattttttcgcgattttcctaggaactgaaacatcgaaaaagaagaacaaaaaaatcgacgtcgtctagtgaagtttac ggatatccgagtcccccgttctctgctcacattttatcttcatgctttaaagtagggctcattcattcggagaatcagac tcttgctttcctctctctgtctgcgtacgctgtcgctaagctttccccgttcggacactacagaccaaaattcttgtatt cattttgctttcgatactcctcggattgttaccatatctaagggcccttatcaaacaaaccggaaccggaaatatcatat aagactgaacatagatgtgtaaattctttacgctgcatttaatggaatatttttattttcatattttgatatgtaaaaat tggatcgtagactcatggataagttatttattttataatctatgaatttacgcttcttaattattactctgtacgtacaa tgtgatttttaagatgtgaagaggctgtgttgtgaaataaacattttaaacaaa |
|
Protein
| Protein ID | pfu_aug1.1_8205.1_80044.t1 |
|---|---|
| Definition | - |
>pfu_aug1.1_8205.1_80044.t1 PTCGSKPVEKHQVQFSYEQLKNSHGVIGLQSGTNKFASQKGMRGGFGAVRHISDIRADDLSRDGQDNIGLQAGSNKFASQ KGMTGFGAVRHIADIRADDYNKESSTDISLQSGTNKFASQKGMRGGFGAVRHISDIRADQYSEEGKSFINLQAGSNQFAS QKGMTGFGAVRHIADIRADDLDREAASTVSLQYGTNQFDSQAGMRGFGAQRHVSDIKVNDLAEQLRMQQMGVTPQQYTQI KREEEEAENDM |
|