Gene
| Gene Model ID | pfu_aug2.0_1.1_03318 |
|---|---|
| Locus | scaffold1.1 : 38205 ... 78335 : - |
| To GenomeBrowser | scaffold1.1:38205..78335 |
| Genes list of scaffold | scaffold1.1 |
| Synonym | pfu_aug1.0_197.1_22067 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| g-box-binding factor-like | GO:0003677 GO:0006351 GO:0046872 GO:0050794 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1.1_03318.t1 | 2 | 1 | zf-C4 | 151 | 219 | 2.52234e-44 | 149.3 | 1.2e-20 | 8.6e-17 | 61.1 |
| pfu_aug2.0_1.1_03318.t1 | 2 | 2 | zf-C4 | 235 | 303 | 2.52234e-44 | 149.3 | 1.0e-30 | 7.7e-27 | 93.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1.1_03318.t1 | gi|676441950|ref|XP_009049651.1| | hypothetical protein LOTGIDRAFT_141771, partial [Lottia gigantea] | 0.0 |
| pfu_aug2.0_1.1_03318.t1 | gi|675891348|ref|XP_009031176.1| | hypothetical protein HELRODRAFT_70853, partial [Helobdella robusta] | 0.0 |
| pfu_aug2.0_1.1_03318.t1 | gi|524916343|ref|XP_005112950.1| | PREDICTED: G-box-binding factor-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_1.1_03318.t1 | gi|390336665|ref|XP_003724398.1| | 0.0 | |
| pfu_aug2.0_1.1_03318.t1 | gi|524878482|ref|XP_005095926.1| | PREDICTED: uncharacterized protein LOC101858854 [Aplysia californica] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1.1_03318.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1.1_03318.t1 atgaagtactcatggtcccctacaagtgttgttgtttttcgtccggatctgtcaacaggtggcgccaccacagccaaaaa tgagaagaagagcgcgagtccatgcaaaaaagaacagaagaaatccaatgaaccgggtgaaaatgagcaagagagagtat caagagaagatagagaggaccctattgtcatagaccacccggcatcgtcatcgaaagaaaatattcaagataacaagaaa ggaggctaccaccacggtggcctcgcctcactacatcatcattacttctcaccctactacttccccaggaagagatcagc atacccatgttcatacttcgcaggtgcatacggtctaccttctagattagatgacgatgtggctttccccactgatatta aactagaacgagcagacgactgtatccctgacgacgacaaagatttcaaaatctgcgtggtatgcggagagcgagctagc ggctattacttcggagctctcgtctgtcttccctgtaagagcttttatatcagatgtacgaaagatggagagccaaactt cacgtgtcagtgtaacggaaactgcgacattgctaaacaggggcgaattcgatgtcagtattgtcggtaccagagatgtc tcatggctggaatgtgccgaaaagagaaaccagaaacggtacagcctcaagacggacaagtattgtgcaaagtgtgcgga gacatagcgaatggaattcacttcggcgtaaacacgtgcgagggctgcaagaaatttttccgacgtggtcttgtagagaa tcagagctatctatgtaaaagtgaaaagaaatgtggcatcaaccctcgtaacaggaacaactgccgatactgtcggtatc agaagtgtatcggggtcggaatgtccagagaagcaatcaagatgggacgaccgaagaaagcggaaacaagtgatttggcc gcttcctcaaatatcacagagccactttcatttgaggacagttcctcgagtcctatttccccctctcgtcaggacaagac accgtcaccccagggacatagcctttcaccaagttccactccaccaagaacaacaggaagccctctttttgacctttcca aggtcaaaaccgagccaattataactgacttggatcagaacatcccagaacaacagaatcagtcatcaatggttagtatc catagcgacggtcagatgtacacgcccacaccaataacgtcatatgccacgtcaagcgtgggaaattggacgagtgctac cagctctataccaatggtatcacagccccaaatgtcatgtgcccagacaaactggcaccaacacatctcccactctgtag cccagcaacagatgataacaagtgctccaacgtcatcaaacgttaccatgacaacctccaaaactggagattctcatgct ccacaattggcccagaataatcaaaattcacaatgcatcatgggaaatacgagcgtcccatcattccctgttccaacaca gaaacagtttgatcagcagataagagatttccgtgatcatcattcaccagttcataacgatcatttcaatcaactgacaa tcgacacggcagcgtcacctatgtcacgtgactgtgctgctatgtattcacaagtatcccctcatggtcaccagtaccca tcatccccctctcacacccagtataactcgaactcgcccaccggagcgcagtcccagatgtatgcccctcactcaccatc acaggacaacatgtatggaacacgtcaaactttacataaatcaatgtacaatcaaacaagtcctcaacaggatgctcagt atggttccagtcctgtcatgcagaacaacatgtatggtcctagttcaccttcagcacagagtgggccatacagtcctcag ccttcccactttacaccgtcatcaaatcaggtctacccacacagccagtatcagcctccatctgaaagctgccagtacaa cgctggttccccagccagtaactatagcgctggatctcctgctagccactacagcgcaggttcccctgctagccactaca atgctggctcgccagttagccactgctccatgtcaccaccatatcaacctgcacaatcccatactcaacagcccaacaat gtccaccatggaccttacatggacgtaaaggcctcaatgaggattaatcagcaattcctgaactgtgacaatatgggata cgtcattgcagagaacgaagagccacgaatggacggactgaccaagcatgatgtcgattctacagttgtagaaaactgcc tgaagaaaaatgttggattcgcacagtatcgttgtcagacgaattacagtcctggatcctccccaaggagcgttcacagc ggcagtgatgactcccaagatggctaccaagaaggtagtaggatgaaccggaagaggaaggcagtaaacgaaagttgcag ctttggaggaagagaaaatgcatacagtcaatgcctgtacaatcaaggtggccagaatgactttatttgtgagcgttaca gcatgatggacacacaagcttactggtccagacctttgtcatacagtggtcctatggtgccacaagacgaggcattcaca gttatcaaacacttgatgaacggatacaacaagatcaaagatgtgtgtgacgaatccaagtcatctaggaattcactgat attttttttncctatggtgccacaagacgaggcattcacagttatcaaacacttgatgaacggatacaacaagatcaaag atgtgtgtgacgaatccaagtcatctaggaattcactggatgttcattggccaaaaatggggtcagagtcaaatcattgg tcacatattcagcgccgcagtatcagaaacactctgtgctgcacagaattcttcaagtcgatccctgattttaggtactt gaaggatccagaggcaatagaggatatgagacaaagattgattaacatactaatggctcatctagcagcacaaggggtag accctgtgaaacgtgttcaggaactgttcagtgtcgtgccaggattacgtcacatgaccatgtggcacaaacagctaatg aaaatgatgaaggctaacatagagctacaggaggtgcagcaagtctttgatgatcttgttcttaacatggacaggttcga gccacagtgtgctccatcaacttgtgcaaattcctcttcattgccaccttactga |
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Protein
| Protein ID | pfu_aug2.0_1.1_03318.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1.1_03318.t1 MKYSWSPTSVVVFRPDLSTGGATTAKNEKKSASPCKKEQKKSNEPGENEQERVSREDREDPIVIDHPASSSKENIQDNKK GGYHHGGLASLHHHYFSPYYFPRKRSAYPCSYFAGAYGLPSRLDDDVAFPTDIKLERADDCIPDDDKDFKICVVCGERAS GYYFGALVCLPCKSFYIRCTKDGEPNFTCQCNGNCDIAKQGRIRCQYCRYQRCLMAGMCRKEKPETVQPQDGQVLCKVCG DIANGIHFGVNTCEGCKKFFRRGLVENQSYLCKSEKKCGINPRNRNNCRYCRYQKCIGVGMSREAIKMGRPKKAETSDLA ASSNITEPLSFEDSSSSPISPSRQDKTPSPQGHSLSPSSTPPRTTGSPLFDLSKVKTEPIITDLDQNIPEQQNQSSMVSI HSDGQMYTPTPITSYATSSVGNWTSATSSIPMVSQPQMSCAQTNWHQHISHSVAQQQMITSAPTSSNVTMTTSKTGDSHA PQLAQNNQNSQCIMGNTSVPSFPVPTQKQFDQQIRDFRDHHSPVHNDHFNQLTIDTAASPMSRDCAAMYSQVSPHGHQYP SSPSHTQYNSNSPTGAQSQMYAPHSPSQDNMYGTRQTLHKSMYNQTSPQQDAQYGSSPVMQNNMYGPSSPSAQSGPYSPQ PSHFTPSSNQVYPHSQYQPPSESCQYNAGSPASNYSAGSPASHYSAGSPASHYNAGSPVSHCSMSPPYQPAQSHTQQPNN VHHGPYMDVKASMRINQQFLNCDNMGYVIAENEEPRMDGLTKHDVDSTVVENCLKKNVGFAQYRCQTNYSPGSSPRSVHS GSDDSQDGYQEGSRMNRKRKAVNESCSFGGRENAYSQCLYNQGGQNDFICERYSMMDTQAYWSRPLSYSGPMVPQDEAFT VIKHLMNGYNKIKDVCDESKSSRNSLIFFXPMVPQDEAFTVIKHLMNGYNKIKDVCDESKSSRNSLDVHWPKMGSESNHW SHIQRRSIRNTLCCTEFFKSIPDFRYLKDPEAIEDMRQRLINILMAHLAAQGVDPVKRVQELFSVVPGLRHMTMWHKQLM KMMKANIELQEVQQVFDDLVLNMDRFEPQCAPSTCANSSSLPPY |
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