Gene
| Gene Model ID | pfu_aug2.0_1.1_03319 |
|---|---|
| Locus | scaffold1.1 : 100679 ... 105765 : - |
| To GenomeBrowser | scaffold1.1:100679..105765 |
| Genes list of scaffold | scaffold1.1 |
| Synonym | pfu_aug1.0_104173.1_64248 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| activating transcription factor 7-interacting protein 1 isoform x1 | GO:0050794 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1.1_03319.t1 | 1 | 1 | DUF3504 | 161 | 258 | 4.4e-07 | 29.8 | 1.3e-10 | 9.7e-07 | 28.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1.1_03319.t1 | gi|676486090|ref|XP_009063866.1| | hypothetical protein LOTGIDRAFT_155115 [Lottia gigantea] | 8.00001e-41 |
| pfu_aug2.0_1.1_03319.t1 | gi|459179687|ref|XP_002125964.2| | PREDICTED: uncharacterized protein LOC100186276 [Ciona intestinalis] | 1.0e-19 |
| pfu_aug2.0_1.1_03319.t1 | gi|742227247|ref|XP_010900033.1| | PREDICTED: zinc finger MYM-type protein 3-like isoform X2 [Esox lucius] | 2.0e-17 |
| pfu_aug2.0_1.1_03319.t1 | gi|742227243|ref|XP_010900032.1| | PREDICTED: zinc finger MYM-type protein 3-like isoform X1 [Esox lucius] | 2.0e-17 |
| pfu_aug2.0_1.1_03319.t1 | gi|733869671|ref|XP_010708362.1| | PREDICTED: activating transcription factor 7-interacting protein 1 isoform X1 [Meleagris gallopavo] | 3.0e-15 |
Transcript
| Transcript ID | pfu_aug2.0_1.1_03319.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1.1_03319.t1 atgggagtgagaccaggtgcccaggaagatttctttgacttcaaactccgaaggatagatactgctgaggtaatcggcga attttggattattgatggacaacacattgtctatgtatctcacagtacaataaaaaaattgtcaaaatctgttattgctg aaaagctcaggtctttttactgtgagacaacaccaaagaatgttgatggaagggcaaaaggcatgtctaaagatcaggcc gcagagtatcacaaaaactcatttgtaaacatgaaagcagctataaaccgacatctacacgacttagatttggacatgga cattgttcgggatcaggaatttctccatgcaaaccgtgcattagatggtacactgaaaaatcaaacgaaaaaaggtatcg cccgttcaactgaacacaaaaaggtcatcaacacgaatgatttgagaaagatctctacataccttagtactggataccgt tcttcgcccattatcttacgacaagctgtatggttccttatttcaatgcattttgtcacccgtggcatggaatttcacta tcagctgctgagggattctttcgaaataaaggctgatgaaaatggggatgagtacgcctcattggcacaagaaacactcc agaaaaatttccagggagatctgtgcagtgaggaagcaccccaagataggcgaatgtatgccgtaaatgaatcagagtta tgtcccctgaaagttctccaattttaccttgatcacttacatcctgaatcaatgcacttatttaatcactgcgataagga agctctcttgtttccagaaaaagaaagatacctggtacattccaaagccactttccaagaagggattttccagtttcatg catga |
|
Protein
| Protein ID | pfu_aug2.0_1.1_03319.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1.1_03319.t1 MGVRPGAQEDFFDFKLRRIDTAEVIGEFWIIDGQHIVYVSHSTIKKLSKSVIAEKLRSFYCETTPKNVDGRAKGMSKDQA AEYHKNSFVNMKAAINRHLHDLDLDMDIVRDQEFLHANRALDGTLKNQTKKGIARSTEHKKVINTNDLRKISTYLSTGYR SSPIILRQAVWFLISMHFVTRGMEFHYQLLRDSFEIKADENGDEYASLAQETLQKNFQGDLCSEEAPQDRRMYAVNESEL CPLKVLQFYLDHLHPESMHLFNHCDKEALLFPEKERYLVHSKATFQEGIFQFHA |
|