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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_1.1_03320
Locus scaffold1.1 : 109516 ... 121675 : +
To GenomeBrowser scaffold1.1:109516..121675
Genes list of scaffold scaffold1.1
Synonym pfu_aug1.0_197.1_22071

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_1.1_03320.t1 gi|676483673|ref|XP_009063100.1| hypothetical protein LOTGIDRAFT_167364 [Lottia gigantea] 3.0e-25
pfu_aug2.0_1.1_03320.t1 gi|115733077|ref|XP_001180574.1| PREDICTED: cell death regulator Aven [Strongylocentrotus purpuratus] 7.0e-25
pfu_aug2.0_1.1_03320.t1 gi|115668602|ref|XP_001197910.1| PREDICTED: cell death regulator Aven [Strongylocentrotus purpuratus] 2.0e-23
pfu_aug2.0_1.1_03320.t1 gi|556994407|ref|XP_006001200.1| PREDICTED: cell death regulator Aven [Latimeria chalumnae] 1.0e-16
pfu_aug2.0_1.1_03320.t1 gi|527262185|ref|XP_005149332.1| PREDICTED: cell death regulator Aven [Melopsittacus undulatus] 4.0e-16

Transcript
Transcript IDpfu_aug2.0_1.1_03320.t1
Definition-
>pfu_aug2.0_1.1_03320.t1
atgcgacccgatgaacacaagaaaaagaaaaacactcagtataaaaagaagcatggcatcagtgagaataaaacaactgg
aaataaacaaaatgtacaaagacaagaaaaagaaaataagctaaaaactgaagaaactttggagaggcgagcgcaaggca
gaacagttgaagtggattttgacaacaacgttgagaaggagcaaccttcccataatgcctcatttcgacgtcgtcaggta
gtcagtaactgggacagataccatgagccagaagttgatgatgtccacattggccctacatccaggggagagaacttcct
caaactccttgactctgctggagcagcctcagctcagttcagatttaaagatgaagaatcatgggaagatcaggaaactg
accaatcagaggcaacttgcctcaatgtggatttgtcttccttagctaccaatttgagttgtattcctctgcatgaaaga
cttggcttggatcaaagtctctttacagaggaagaactgaacaagatgacggaagatgcagtaaaggccagatccttccg
ctgcacgtcagcaacgacgtctactgatcgttatgtaaaaggatccgtaaatactagcaacattgtccaaaaagattcaa
gaaaactgtga

Protein
Protein IDpfu_aug2.0_1.1_03320.t1
Definition-
>pfu_aug2.0_1.1_03320.t1
MRPDEHKKKKNTQYKKKHGISENKTTGNKQNVQRQEKENKLKTEETLERRAQGRTVEVDFDNNVEKEQPSHNASFRRRQV
VSNWDRYHEPEVDDVHIGPTSRGENFLKLLDSAGAASAQFRFKDEESWEDQETDQSEATCLNVDLSSLATNLSCIPLHER
LGLDQSLFTEEELNKMTEDAVKARSFRCTSATTSTDRYVKGSVNTSNIVQKDSRKL

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