Gene
| Gene Model ID | pfu_aug2.0_1.1_03321 |
|---|---|
| Locus | scaffold1.1 : 123517 ... 137425 : - |
| To GenomeBrowser | scaffold1.1:123517..137425 |
| Genes list of scaffold | scaffold1.1 |
| Synonym | pfu_aug1.0_197.1_22072 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1.1_03321.t1 | 1 | 1 | adh_short | 47 | 192 | 5.4e-21 | 75.2 | 5.3e-24 | 8.7e-21 | 74.5 |
| pfu_aug2.0_1.1_03321.t1 | 1 | 1 | KR | 48 | 190 | 7.9e-08 | 32.1 | 7.6e-11 | 1.3e-07 | 31.5 |
| pfu_aug2.0_1.1_03321.t1 | 3 | 1 | adh_short_C2 | 55 | 194 | 2.3e-09 | 37.4 | 5.9e-12 | 9.7e-09 | 35.3 |
| pfu_aug2.0_1.1_03321.t1 | 3 | 2 | adh_short_C2 | 194 | 246 | 2.3e-09 | 37.4 | 0.26 | 430.0 | 0.4 |
| pfu_aug2.0_1.1_03321.t1 | 3 | 3 | adh_short_C2 | 276 | 294 | 2.3e-09 | 37.4 | 2.2 | 3700.0 | -2.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1.1_03321.t1 | gi|676471628|ref|XP_009059234.1| | hypothetical protein LOTGIDRAFT_218247 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_1.1_03321.t1 | gi|524889859|ref|XP_005101481.1| | PREDICTED: dehydrogenase/reductase SDR family member 7-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_1.1_03321.t1 | gi|556946612|ref|XP_005986487.1| | PREDICTED: dehydrogenase/reductase SDR family member 7 [Latimeria chalumnae] | 0.0 |
| pfu_aug2.0_1.1_03321.t1 | gi|524880709|ref|XP_005097015.1| | PREDICTED: dehydrogenase/reductase SDR family member 7-like isoform X1 [Aplysia californica] | 0.0 |
| pfu_aug2.0_1.1_03321.t1 | gi|573889239|ref|XP_006632385.1| | PREDICTED: dehydrogenase/reductase SDR family member 7-like [Lepisosteus oculatus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1.1_03321.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1.1_03321.t1 atggacattttgagccttgccttggtggggttaactgtatatacaatagtccagtgtgttagacttctgaaatctgactg tgacctctctctacagtgggcggaaatctttggatgctcaacaggaagcttgaagggaaaggttgtatggattgtgggag catcgagtggtataggggaagctctagcttacagactggcacaggatggctgtatactcatcctctcatccagaagagaa gatagactgaaacaagtcagtaataaatgtctcgagtatggtacaatacagcacaaggatatattggttctgccattgga catgctggattataaatctcatgtggctgccgtggaaacagttattaaatactttaaaaaaattgatattctggtcaaca atgcagggaggtctcagagagcattatgggagaagacgagcttggaggtcgacaggcagatgctcaatacaaacatacta ggacctctgtctattactaaggcagttctacctcactttatacagcagaaatctggccatgttgtggtcaccagtagtct agcaggaaaatttgaggggtacgagtataacataaatgttactatggtatgtcctggaccagtcttctcagaggcactac aacacgcttttacagagaatgagggacagatactaggtgtagatatgaagccaggggaaaaccgcatgccggcggaacgt tgtgccgcattgatggctgttgccatggcaaacaatatggatgaagtttggataacacgtaacccagagttattttatac gtaccttttccagtattgtcctgccattgctaggagtcttgccaaaagactcggacaaagtagaagaaacaagattaaag ccggagttaaggatcttcataagtga |
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Protein
| Protein ID | pfu_aug2.0_1.1_03321.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1.1_03321.t1 MDILSLALVGLTVYTIVQCVRLLKSDCDLSLQWAEIFGCSTGSLKGKVVWIVGASSGIGEALAYRLAQDGCILILSSRRE DRLKQVSNKCLEYGTIQHKDILVLPLDMLDYKSHVAAVETVIKYFKKIDILVNNAGRSQRALWEKTSLEVDRQMLNTNIL GPLSITKAVLPHFIQQKSGHVVVTSSLAGKFEGYEYNINVTMVCPGPVFSEALQHAFTENEGQILGVDMKPGENRMPAER CAALMAVAMANNMDEVWITRNPELFYTYLFQYCPAIARSLAKRLGQSRRNKIKAGVKDLHK |
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