Gene
| Gene Model ID | pfu_aug2.0_1.1_03322 |
|---|---|
| Locus | scaffold1.1 : 156266 ... 175797 : + |
| To GenomeBrowser | scaffold1.1:156266..175797 |
| Genes list of scaffold | scaffold1.1 |
| Synonym | pfu_aug1.0_7448.1_52960 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| gtp cyclohydrolase partial | GO:0003934 GO:0005525 GO:0005829 GO:0006729 GO:0008270 GO:0014916 GO:0031410 GO:0031965 GO:0032496 GO:0034341 GO:0034612 GO:0042416 GO:0042803 GO:0043234 GO:0046654 GO:0050884 GO:0051000 GO:0051260 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1.1_03322.t1 | 1 | 1 | GTP_cyclohydroI | 56 | 189 | 0.0 | 210.8 | 0.0 | 0.0 | 210.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1.1_03322.t1 | gi|557280339|ref|XP_006023173.1| | PREDICTED: GTP cyclohydrolase 1, partial [Alligator sinensis] | 0.0 |
| pfu_aug2.0_1.1_03322.t1 | gi|719750311|ref|XP_010212729.1| | PREDICTED: GTP cyclohydrolase 1, partial [Tinamus guttatus] | 0.0 |
| pfu_aug2.0_1.1_03322.t1 | gi|564261719|ref|XP_006269749.1| | PREDICTED: GTP cyclohydrolase 1-like, partial [Alligator mississippiensis] | 0.0 |
| pfu_aug2.0_1.1_03322.t1 | gi|558148752|ref|XP_006120181.1| | PREDICTED: GTP cyclohydrolase 1 [Pelodiscus sinensis] | 0.0 |
| pfu_aug2.0_1.1_03322.t1 | gi|529446718|ref|XP_005243063.1| | PREDICTED: GTP cyclohydrolase 1 [Falco peregrinus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1.1_03322.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1.1_03322.t1 atgtcagaagaaagcagtcaacgaaaatctcaagactctgtctcaaaaatgcagaactcggacaacacggatcttgtgaa aatgggtggtgggggtgatcatggtgattccaacccctccaatcatatgttcgcgaacggcgacggggatttcagattat caaatgcccttaacgatgcaattttcgatgaagatcacgatgaaatggtgatagttaaagacatagaaatgttttctcta tgtgaacatcatttggtgccttttctaggaaaagtttctataggttatttaccaaacaaacgggtgctcggacttagcaa attagcaagaattgttgaaatatacagtagacgattacaggtgcaagagaggctgaccaagcagatagccgtggccataa cagatgctatacagccttctggagtcggcgtcgtcatagaggccacgcacatgtgtatggtaatgagaggtgtacagaag tccaacagtaagacagtgaccagtaccatgctcggtgtattcagagaggatccgaaaactagagaggagttcctctcact tattaggtaa |
|
Protein
| Protein ID | pfu_aug2.0_1.1_03322.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1.1_03322.t1 MSEESSQRKSQDSVSKMQNSDNTDLVKMGGGGDHGDSNPSNHMFANGDGDFRLSNALNDAIFDEDHDEMVIVKDIEMFSL CEHHLVPFLGKVSIGYLPNKRVLGLSKLARIVEIYSRRLQVQERLTKQIAVAITDAIQPSGVGVVIEATHMCMVMRGVQK SNSKTVTSTMLGVFREDPKTREEFLSLIR |
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