Gene
| Gene Model ID | pfu_aug2.0_1.1_03324 |
|---|---|
| Locus | scaffold1.1 : 220752 ... 228212 : + |
| To GenomeBrowser | scaffold1.1:220752..228212 |
| Genes list of scaffold | scaffold1.1 |
| Synonym | NA |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| mitochondrial 2-oxodicarboxylate carrier | GO:0016021 GO:0055085 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1.1_03324.t1 | 2 | 1 | Mito_carr | 21 | 107 | 0.0 | 159.2 | 1.8e-30 | 2.7e-26 | 91.1 |
| pfu_aug2.0_1.1_03324.t1 | 2 | 2 | Mito_carr | 119 | 218 | 0.0 | 159.2 | 4.1e-22 | 6.1e-18 | 64.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1.1_03324.t1 | gi|524905682|ref|XP_005108206.1| | PREDICTED: mitochondrial 2-oxodicarboxylate carrier-like isoform X1 [Aplysia californica] | 0.0 |
| pfu_aug2.0_1.1_03324.t1 | gi|676460707|ref|XP_009055712.1| | hypothetical protein LOTGIDRAFT_161613 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_1.1_03324.t1 | gi|530635182|ref|XP_005304461.1| | PREDICTED: mitochondrial 2-oxodicarboxylate carrier [Chrysemys picta bellii] | 0.0 |
| pfu_aug2.0_1.1_03324.t1 | gi|675855834|ref|XP_009013477.1| | hypothetical protein HELRODRAFT_110114 [Helobdella robusta] | 0.0 |
| pfu_aug2.0_1.1_03324.t1 | gi|532073957|ref|XP_005322785.1| | PREDICTED: mitochondrial 2-oxodicarboxylate carrier [Ictidomys tridecemlineatus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1.1_03324.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1.1_03324.t1 atgtctacagacaaccctgtcagtcctagaataagaagtcagcgtactctggatctcatgcagtttgcttcaggaggatg tgcaggttttgtagaagtatctataatgcatccgttggacctgataaagacgaggttccaaatacaaagaggaccagagg acccgaatagatacacatctattatagattgtgtcaagaagatgtacagacatgaaggggccttatctttttacaaagga atcttcccgccactttttgcagagacgcctaaacgagctgtcaaattttttacttttgagagatataaagaattatttgc ttataatggatatctacctcaatcagcaatttttgcgttttctggtttatgctcagggttaactgaggctgtagttatta atccatttgaagttgttaaagtcaagatgcaagctgacagacacaaatttacagatcaaaaaagtacatacgctacagct agagaaattctgcgtacacatggctttggaaaacaaggactcgccttagtatatagagaagaaggattttttgccctgta taaaggtcttcttcctaaagtcctacgactcggaccaggtggtgccataatgatgttggtttatgaacatacctttgagt ggctaaaagaaaacttcccgtattag |
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Protein
| Protein ID | pfu_aug2.0_1.1_03324.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1.1_03324.t1 MSTDNPVSPRIRSQRTLDLMQFASGGCAGFVEVSIMHPLDLIKTRFQIQRGPEDPNRYTSIIDCVKKMYRHEGALSFYKG IFPPLFAETPKRAVKFFTFERYKELFAYNGYLPQSAIFAFSGLCSGLTEAVVINPFEVVKVKMQADRHKFTDQKSTYATA REILRTHGFGKQGLALVYREEGFFALYKGLLPKVLRLGPGGAIMMLVYEHTFEWLKENFPY |
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