Gene
| Gene Model ID | pfu_aug2.0_1.1_03328 |
|---|---|
| Locus | scaffold1.1 : 261112 ... 295778 : + |
| To GenomeBrowser | scaffold1.1:261112..295778 |
| Genes list of scaffold | scaffold1.1 |
| Synonym | pfu_aug1.0_10703.1_02963 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| metastasis suppressor protein 1 isoform x7 | GO:0003785 GO:0005102 GO:0007015 GO:0007169 GO:0015629 GO:0022607 GO:0030139 GO:0042802 GO:0050673 GO:0061333 GO:0072006 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1.1_03328.t1 | 1 | 1 | IMD | 19 | 246 | 0.0 | 182.2 | 0.0 | 0.0 | 181.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1.1_03328.t1 | gi|578816294|ref|XP_006716770.1| | PREDICTED: metastasis suppressor protein 1 isoform X17 [Homo sapiens] | 0.0 |
| pfu_aug2.0_1.1_03328.t1 | gi|694928254|ref|XP_009454167.1| | PREDICTED: metastasis suppressor protein 1 isoform X7 [Pan troglodytes] | 0.0 |
| pfu_aug2.0_1.1_03328.t1 | gi|675758841|ref|XP_008972177.1| | PREDICTED: metastasis suppressor protein 1 isoform X7 [Pan paniscus] | 0.0 |
| pfu_aug2.0_1.1_03328.t1 | gi|578816292|ref|XP_006716769.1| | PREDICTED: metastasis suppressor protein 1 isoform X12 [Homo sapiens] | 0.0 |
| pfu_aug2.0_1.1_03328.t1 | gi|642929063|ref|XP_008195676.1| | PREDICTED: flocculation protein FLO11 isoform X3 [Tribolium castaneum] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1.1_03328.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1.1_03328.t1 atgatggagggaaataacacgatagataaagactgcagcgctcttggtggcctgttccaaactatagtcaatgacatgag gaacagttcagtgatatgggaggatttcgctgggaaagcgtcgaagcttcacacgtctttgaaggcgaccctaggtgcca ttgggatatttttagatgcctttcagaaagtagccgacatggcgaccagcagtagagcttcatttctcccagatcaggag cttaatacctcagtaggttacatctgtggccatgtgggctctgttagaaaagaagcagtaattttaaggtccattgtgga aactctagtcactccattacaggagcataatgaagaatggaagaaaacagtgatacagttggacaaggatcatgccagag aatataaaagagcgaggacagaaataaagaaagctgcatcggacaccatgcgattgcagaaaaaggtcaaaaaaggtaac acaacaggtaaaggtgagatgcaagccaagcttgacaacgccatgcatgatattaacgataaatacttggtgttcgagga gtcagagaagaatgcagtgagaagggccttgatagaagagaggggacattactgtttgtttgttagctgtctgagacctt ttgtggaacatgagatcagtttgataactgagatcacccatctacaagagatcatgcagaatctatgtatgcagtgttca gatcccagtgtcctacccccagctagtgaacaagttataatggacgttaaaggctttgactctagtagtgtatggaactt ctcacagcattctccgccgagttcacccagttctctcgggtcacgtaaatccagtatgtgtagtataagcagtattaata gcagttctagcggatctctcaagtcccattcaccgagtcatcacaatcataaacggaactctgctcagcaattgcctgtg ggagctgcaaggctcaccagtgtttcttcccaagactccggattcacatcccaggatacgttatttctgcgaccggccac tccttcttctttaaaaataaaaaagaaggacgttgacacaagtcaaggagttgacaatactgatgctgattcccagtcat ccaccccgtctgataacacaccatcggcaagttctacttggaccaactggccaaatccacccaatcaaaatacaaaaacc gaggaaaatcgacctcacactatctctactgcatatgaaagaaacaacaaaaatgctcgacccgcactatcggcaacttt gtttgagcctccaaatggcgaaaatacaatggaggaggaagaggaagaaatcagatga |
|
Protein
| Protein ID | pfu_aug2.0_1.1_03328.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1.1_03328.t1 MMEGNNTIDKDCSALGGLFQTIVNDMRNSSVIWEDFAGKASKLHTSLKATLGAIGIFLDAFQKVADMATSSRASFLPDQE LNTSVGYICGHVGSVRKEAVILRSIVETLVTPLQEHNEEWKKTVIQLDKDHAREYKRARTEIKKAASDTMRLQKKVKKGN TTGKGEMQAKLDNAMHDINDKYLVFEESEKNAVRRALIEERGHYCLFVSCLRPFVEHEISLITEITHLQEIMQNLCMQCS DPSVLPPASEQVIMDVKGFDSSSVWNFSQHSPPSSPSSLGSRKSSMCSISSINSSSSGSLKSHSPSHHNHKRNSAQQLPV GAARLTSVSSQDSGFTSQDTLFLRPATPSSLKIKKKDVDTSQGVDNTDADSQSSTPSDNTPSASSTWTNWPNPPNQNTKT EENRPHTISTAYERNNKNARPALSATLFEPPNGENTMEEEEEEIR |
|