Gene
| Gene Model ID | pfu_aug2.0_1.1_03330 |
|---|---|
| Locus | scaffold1.1 : 306876 ... 318961 : - |
| To GenomeBrowser | scaffold1.1:306876..318961 |
| Genes list of scaffold | scaffold1.1 |
| Synonym | pfu_aug1.0_10703.1_02962 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| death-inducer obliterator 1 isoform x1 | GO:0000166 GO:0003676 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1.1_03330.t1 | 5 | 1 | RRM_6 | 5 | 60 | 0.0 | 154.7 | 7.4e-13 | 2.2e-09 | 37.1 |
| pfu_aug2.0_1.1_03330.t1 | 5 | 1 | RRM_1 | 7 | 65 | 7.5e-35 | 118.4 | 1.1e-06 | 0.0033 | 17.0 |
| pfu_aug2.0_1.1_03330.t1 | 5 | 1 | RRM_5 | 40 | 65 | 5.5e-10 | 38.9 | 0.0063 | 19.0 | 5.2 |
| pfu_aug2.0_1.1_03330.t1 | 1 | 1 | DDE_3 | 462 | 520 | 2.7e-07 | 30.4 | 2.2e-10 | 6.5e-07 | 29.1 |
| pfu_aug2.0_1.1_03330.t1 | 5 | 2 | RRM_6 | 1429 | 1496 | 0.0 | 154.7 | 5.1e-09 | 1.5e-05 | 24.8 |
| pfu_aug2.0_1.1_03330.t1 | 5 | 2 | RRM_1 | 1429 | 1497 | 7.5e-35 | 118.4 | 3.3e-10 | 9.8e-07 | 28.3 |
| pfu_aug2.0_1.1_03330.t1 | 5 | 2 | RRM_5 | 1465 | 1478 | 5.5e-10 | 38.9 | 3.5 | 10000.0 | -3.6 |
| pfu_aug2.0_1.1_03330.t1 | 5 | 3 | RRM_6 | 1567 | 1626 | 0.0 | 154.7 | 3.1e-07 | 0.00091 | 19.1 |
| pfu_aug2.0_1.1_03330.t1 | 5 | 3 | RRM_1 | 1595 | 1626 | 7.5e-35 | 118.4 | 8.2e-06 | 0.024 | 14.2 |
| pfu_aug2.0_1.1_03330.t1 | 5 | 3 | RRM_5 | 1600 | 1625 | 5.5e-10 | 38.9 | 0.0044 | 13.0 | 5.7 |
| pfu_aug2.0_1.1_03330.t1 | 5 | 4 | RRM_6 | 1764 | 1833 | 0.0 | 154.7 | 5.6e-13 | 1.6e-09 | 37.5 |
| pfu_aug2.0_1.1_03330.t1 | 5 | 4 | RRM_1 | 1767 | 1833 | 7.5e-35 | 118.4 | 9.4e-10 | 2.8e-06 | 26.8 |
| pfu_aug2.0_1.1_03330.t1 | 5 | 4 | RRM_5 | 1805 | 1836 | 5.5e-10 | 38.9 | 2.2e-05 | 0.067 | 13.0 |
| pfu_aug2.0_1.1_03330.t1 | 5 | 5 | RRM_6 | 1965 | 2031 | 0.0 | 154.7 | 2.0e-10 | 5.9e-07 | 29.3 |
| pfu_aug2.0_1.1_03330.t1 | 5 | 5 | RRM_1 | 1965 | 2032 | 7.5e-35 | 118.4 | 2.8e-09 | 8.3e-06 | 25.3 |
| pfu_aug2.0_1.1_03330.t1 | 5 | 5 | RRM_5 | 2002 | 2035 | 5.5e-10 | 38.9 | 0.00052 | 1.5 | 8.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1.1_03330.t1 | gi|524906263|ref|XP_005108462.1| | PREDICTED: uncharacterized protein LOC101850281 [Aplysia californica] | 2.0e-29 |
| pfu_aug2.0_1.1_03330.t1 | gi|241999526|ref|XP_002434406.1| | RNA-binding protein, putative [Ixodes scapularis] | 5.0e-27 |
| pfu_aug2.0_1.1_03330.t1 | gi|159479288|ref|XP_001697725.1| | hypothetical protein CHLREDRAFT_105488 [Chlamydomonas reinhardtii] | 4.0e-21 |
| pfu_aug2.0_1.1_03330.t1 | gi|736205323|ref|XP_010775655.1| | PREDICTED: death-inducer obliterator 1 isoform X2 [Notothenia coriiceps] | 5.0e-08 |
| pfu_aug2.0_1.1_03330.t1 | gi|736205331|ref|XP_010775657.1| | PREDICTED: death-inducer obliterator 1 isoform X4 [Notothenia coriiceps] | 5.0e-08 |
Transcript
| Transcript ID | pfu_aug2.0_1.1_03330.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1.1_03330.t1 atgtcggtgatcataagacttcagggtttaccatggagtgccagtgcagcggacatccgccagttcttcaagggactcaa tatcccgccagggggcgtacacatcatcggcggcgagaagggcgacgctttcatcgcttttgccacggacgaggacgccc gacaggccatgatgctaaatctcggacagattggtaccaatcaagtcatgctgtaccttagtagtaaaacacaaatgcaa aacgttatcgccgaagctagaggtcaaagtgcagctccggcaccccccgtgtcggctgtttcctccgcgcctccagcgca acaacgccccgctgatccctatcaacagcatccaactagcatggcgaccaacacatcctactcgcaatatccatatggtc aacaacaacagatgccagcccagacgactttagccagtagaaatccctatgatctacccggcctcggatcagagtatggc catcagcaagatcctagtttccaacaacaacagcaaccaccgcaacatcagcccaaccagcaacaacagtggcccggatt acaaggagctgccccaaatcaatatgacccatacggcacagctttaggacagaacaatttacagaaacaaaatgacatgt caaagcaacccgaccctagcaacctagaagcagacagtatgccgcgatctatgagtctatttgacagaaggaaaccacct caaaataaacctaactttgaagatgaatctccaaaagggatggacgatatgcgaaaagacaggtcatcgctggcgtcttc tcaagactcgttgaatctggacggaagtgtgaagagtatgtcatctaatgacgatagatacgggcggggacaaggcgata accgacccccataccagggctacgatcaggggatgaaccaacgaccgatgggtgacccagacgatagatcacgaagtcaa ccccaggggaatcccttcggaatccttaatactgatatcggaggccagttttccaatcctaatttctgggaaaagattgc tgcaggagttagttcagtacccgatgtcaaaacacaacaatatccacccgtatcgaacaacgaccagtcgatgaggagcg accagactatgaggagcgaccagtcgatgaggagcgaccagtctatgggaggcaatcagggaatgagaagcgaccagact atgcacggaggcagtcagggaatgaggagcgaccatagttttggtgacatgagcgcgacgtcgccgatgttgaacactga gtctatggagaatgtcgacgacgtcacgctcaaatctccccatctaaaactattttctttcactgtgagcatagtattgg tcgtatacagatatttatcatacatcgacaatgctcctgttcacaagtctgccactgccatggctgccattcatgattgt ggctttaatttgattgagcatccgccttattcacctgatcttgctccatcagactttcatctattcccgaaactgaaaga ggctatttctggcgaccacttcaagtccgatgatgacgtcatatttgcaatggatggcctcctgaacagtcaagatgagg agttctttaaaagtggtattgaggtccttaaacaccgatggcaaaaggacagatcctacgatagtcgctcgggcgcaggt gatcagtttcaaccttatggaaacccgcaaagtgacacgggacgcttgcctccggatatgggacgtctgtcgtcggatat ggctcgtcagcaacctgatttgaaccgaccaccaccggatatggcacgaccgccacctgatatgggtcgtccgccacatg atatggcacgtccgccaccggacatgggtcgtccgccacctgacatgtcgcgtccgccaccggatatggcacgcctgcca ccggatatggcacgcctatcacaggacaatgtccaaccggatatgggtcggcaaccatcagatgtcggacctccaggaac cgggaacatacgtcaaggattggaaggcggacaccctccgtatgacgatctacggttaggtgatagtacgccagacaatc gaatgaacgacagatacgcacgcgggcaaaatgatccgtactcaaattctatgcgacccgccgatagagatccttattcc cgaccgccatatgatagagattttgggaggggtccctatgatagaccgccgtctgttgatgaaaggtctccattcgacaa taatcctccaagaagcgatcgtccatcgttgctgggtgatcgaccgcgtgatgcggatggaactcccgcaaaaccacttt acaacgcacctccaccaagagacgatgtgtcgccttataaccgacttccacaacaaggtgacatggatagacctgggaca aacagaccgcctcacatggacgaacgttcaccctacgacagagggcagcctatggatccgagtagaccgcacgatcgacc cccttatgatcggcctccgtttgatagaagcaatccacctgacagtcgagatcgcggaccgtacggcgatcaacgctacc ctgatgacagaaattatggtcgacgtgatgacaattcttttgacatgtacggtcgaagaccattttaccctggacgagat atgggacttggtaatcgtgacatgggtcctagcagtcgagatttgggtcctggtagtcgagatatgggtcccggaaatcg agacatgggccctggtagtcgagacatgggtcctggcagtcgagatgtgggccctggcagtcgagacatgggtcctggca gtcgagacatgggtcctggcagtcgagatatgggtcctggcagtcgagatatgggcccaggcagtcgagatatgggtctt ggcagtcgagacatgggtcctggcagtcgagatatgggctctggcagtcgagatatgggtcctggcagtcgagatatggg cccaggcagtcgagatatgggtcccggcagtcgggatttaggatctgttagccgagattcgggaaatcgtgatgttgatc aagatagtagaatccggccagattttgatcgaatgaatcgtgatcgattttcaagtgacagggatacatctatgaacgat agagagagatttgggcgatatccaccaggccaaggaccgcccagtggggatatgccacctaggagggacggtcccccaat accatccatcctggacacgcctatgaacagaccccctggaatacgacctggtatggatcgcttacctctacatcagattg ataataggagtcatattaggtttcaaggaatggagatccgaggacccagaccgttaagaccagtcgtcccgggaatgttt acagatccaaaacaggatcaggatatcaggagtgatagaaaactacccttaccgccaagcgctgctgccatccaggcaaa cgataaaccaaaagatctgccgaaatcaggttccgaagagaaaaagagtgacgataaatcccgagagaagaaagatgacg atcagtcggatagtcgtaatcgtgataaagaccgagactcccgaaggagtgattctgacaggagaagggacgatgacaga cgagatagaactcgtgatcgtgatagggataggtcacgtgacagatctagagaacgggatcgtgacagagaccgtgatcg tgaccgcgatagggaccgtgatagagatcgtgatcgtcgccgtgatgatgatcgtgacagagacaggaggtatagagacg accgtagccgtgactgggataggagagattacggacggagcagagatgatggtcgtgacagcagggggcgtgacgatagg cgggacagtccacgtgacagaaccagggacagtaagagaacggatcaattcggtagaaatacagatcgttctagtgtcgg aaagaatgattcgaaaacttctcaaacaagttcatctcttgccgataaaaagaaaaccgacattaaactgcaacccattg atccgaagggcccgcagaatcaaagggggatcctgggcgcttctcccgcaggagctacacccgtaaccacaatggatctt aataagataccggtaccgcccaccccgcctaaatctacaacagctagtcaacctgcgtctaagccgctcgtaacacagac gccgtcagtaacgaagccggaatccgtaacacaggcgtcatcagtaacacaagcgtcgtcagatacggactctcgagggg tgaagagaccttatatccctcccactccaactacagatatatcagtatttgtgaaaggactaccggcacacgttaactat cgagatttacgtcagtttttcagtggttgtgaaattccttgggatggcatgaaagtaataaacaacgagaaaggcgagcg gaatggcaccgcctacatcaaatttttgaaccaacgtagcttttgggaaggactaaacaagcacgggaaattcatgaacc aaaatcgaatcgaagtaacacgatgcatgttagaagaatttgaaaaagctgttgattcgtatctcccgaatcgtacgctt caaggccaagtttcccccgaaataaaacgaccgagaaaagaggaagtgcagactgagcccgtctcaaacactattccgac tacggcaccgaaaacaactgtgataacagggactaaggaatccttcagtcctcatatcttacaaattagaggactcggca tcgctgccaaaccggaagatgtcaccggattcttcaaggatgtcaagattggtaaagacggtaagggaattcacatcgaa tatgacatgaagcgacgcgcaacaggaattgggttcatcgaattcgactcccatgatgaatataagaaagccttaacgtt tgacaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnncaccaccttattctgtcgtattatacgcttgacaccggcaacttcccgcgaattaagtcagatgaaagaacg catgcgcgaattagaaaaatctactcaaaatggaacagagatcactactccaccaccagcagagagtaatacaccagaat cacgtcagaccggactgctggcaactccaccaaagagggagttgaattttaacgatgcagaccaaaacagttctttcccc tatcattgtgttcatttgcaaggactgccgccattaattcttcgcgacgatattggacattttttcacgggcttagattt tgtgaaacctcaaggaatccaggtagtgcaagattccagagggcgacctttgggagaagcatttgtggagttctcaaatc aagatcactgtcagaaagcagtgagaatgagtggacaattaattaagaatatgccggtaaccgtcaaaccgatagacagg gaagagatgataagctatctccggcaaatgcgaccgccttcacgaggtccgaatccttcaccacagtacagtccacgcga ctcccccgatctactcggaccgaggtcaagaggaccgccacctcgccacggtcttatgggatctcacggacctccaggcg ctctcgcccctagaggaatgtatcccagaatgcggggaccaatgccgcctatgggtatgagacaccccttagggcgattg ccgccccctgggatgagaggcccaccgccggggatgggcggatatccaacgtctgatatggatgggcatcacgattctgg aatgtcggacaaaccgccacagtcacatttcggacgacgatatttagtgaagatgcagggactgcctttcacggtttcga cacgagaaatcattaactttatgagcgcgtataatcctataaatgagagtgttcgaatcatagtgggtagcgatccagat ggtacgtcagcgatcgtcggtttctggtcaatagaggaggcagaaaacgccatcaaagaactagacaaaacttactatgg aaacaaacaaatccacctcgcacctgctaactcttga |
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Protein
| Protein ID | pfu_aug2.0_1.1_03330.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1.1_03330.t1 MSVIIRLQGLPWSASAADIRQFFKGLNIPPGGVHIIGGEKGDAFIAFATDEDARQAMMLNLGQIGTNQVMLYLSSKTQMQ NVIAEARGQSAAPAPPVSAVSSAPPAQQRPADPYQQHPTSMATNTSYSQYPYGQQQQMPAQTTLASRNPYDLPGLGSEYG HQQDPSFQQQQQPPQHQPNQQQQWPGLQGAAPNQYDPYGTALGQNNLQKQNDMSKQPDPSNLEADSMPRSMSLFDRRKPP QNKPNFEDESPKGMDDMRKDRSSLASSQDSLNLDGSVKSMSSNDDRYGRGQGDNRPPYQGYDQGMNQRPMGDPDDRSRSQ PQGNPFGILNTDIGGQFSNPNFWEKIAAGVSSVPDVKTQQYPPVSNNDQSMRSDQTMRSDQSMRSDQSMGGNQGMRSDQT MHGGSQGMRSDHSFGDMSATSPMLNTESMENVDDVTLKSPHLKLFSFTVSIVLVVYRYLSYIDNAPVHKSATAMAAIHDC GFNLIEHPPYSPDLAPSDFHLFPKLKEAISGDHFKSDDDVIFAMDGLLNSQDEEFFKSGIEVLKHRWQKDRSYDSRSGAG DQFQPYGNPQSDTGRLPPDMGRLSSDMARQQPDLNRPPPDMARPPPDMGRPPHDMARPPPDMGRPPPDMSRPPPDMARLP PDMARLSQDNVQPDMGRQPSDVGPPGTGNIRQGLEGGHPPYDDLRLGDSTPDNRMNDRYARGQNDPYSNSMRPADRDPYS RPPYDRDFGRGPYDRPPSVDERSPFDNNPPRSDRPSLLGDRPRDADGTPAKPLYNAPPPRDDVSPYNRLPQQGDMDRPGT NRPPHMDERSPYDRGQPMDPSRPHDRPPYDRPPFDRSNPPDSRDRGPYGDQRYPDDRNYGRRDDNSFDMYGRRPFYPGRD MGLGNRDMGPSSRDLGPGSRDMGPGNRDMGPGSRDMGPGSRDVGPGSRDMGPGSRDMGPGSRDMGPGSRDMGPGSRDMGL GSRDMGPGSRDMGSGSRDMGPGSRDMGPGSRDMGPGSRDLGSVSRDSGNRDVDQDSRIRPDFDRMNRDRFSSDRDTSMND RERFGRYPPGQGPPSGDMPPRRDGPPIPSILDTPMNRPPGIRPGMDRLPLHQIDNRSHIRFQGMEIRGPRPLRPVVPGMF TDPKQDQDIRSDRKLPLPPSAAAIQANDKPKDLPKSGSEEKKSDDKSREKKDDDQSDSRNRDKDRDSRRSDSDRRRDDDR RDRTRDRDRDRSRDRSRERDRDRDRDRDRDRDRDRDRDRRRDDDRDRDRRYRDDRSRDWDRRDYGRSRDDGRDSRGRDDR RDSPRDRTRDSKRTDQFGRNTDRSSVGKNDSKTSQTSSSLADKKKTDIKLQPIDPKGPQNQRGILGASPAGATPVTTMDL NKIPVPPTPPKSTTASQPASKPLVTQTPSVTKPESVTQASSVTQASSDTDSRGVKRPYIPPTPTTDISVFVKGLPAHVNY RDLRQFFSGCEIPWDGMKVINNEKGERNGTAYIKFLNQRSFWEGLNKHGKFMNQNRIEVTRCMLEEFEKAVDSYLPNRTL QGQVSPEIKRPRKEEVQTEPVSNTIPTTAPKTTVITGTKESFSPHILQIRGLGIAAKPEDVTGFFKDVKIGKDGKGIHIE YDMKRRATGIGFIEFDSHDEYKKALTFDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXTTLFCRIIRLTPATSRELSQMKERMRELEKSTQNGTEITTPPPAESNTPESRQTGLLATPPKRELNFNDADQNSSFP YHCVHLQGLPPLILRDDIGHFFTGLDFVKPQGIQVVQDSRGRPLGEAFVEFSNQDHCQKAVRMSGQLIKNMPVTVKPIDR EEMISYLRQMRPPSRGPNPSPQYSPRDSPDLLGPRSRGPPPRHGLMGSHGPPGALAPRGMYPRMRGPMPPMGMRHPLGRL PPPGMRGPPPGMGGYPTSDMDGHHDSGMSDKPPQSHFGRRYLVKMQGLPFTVSTREIINFMSAYNPINESVRIIVGSDPD GTSAIVGFWSIEEAENAIKELDKTYYGNKQIHLAPANS |
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