Gene
| Gene Model ID | pfu_aug2.0_1.1_03331 |
|---|---|
| Locus | scaffold1.1 : 324062 ... 370273 : + |
| To GenomeBrowser | scaffold1.1:324062..370273 |
| Genes list of scaffold | scaffold1.1 |
| Synonym | pfu_aug1.0_13191.1_03325 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| meckelin | GO:0005789 GO:0010826 GO:0030659 GO:0036038 GO:0042384 GO:0048754 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1.1_03331.t1 | 1 | 1 | Meckelin | 134 | 857 | 0.0 | 626.3 | 0.0 | 0.0 | 626.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1.1_03331.t1 | gi|676472635|ref|XP_009059552.1| | hypothetical protein LOTGIDRAFT_192673 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_1.1_03331.t1 | gi|260797905|ref|XP_002593941.1| | hypothetical protein BRAFLDRAFT_98238 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_1.1_03331.t1 | gi|585672618|ref|XP_006818273.1| | PREDICTED: meckelin [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_1.1_03331.t1 | gi|557015995|ref|XP_006008446.1| | PREDICTED: meckelin [Latimeria chalumnae] | 0.0 |
| pfu_aug2.0_1.1_03331.t1 | gi|591371879|ref|XP_007052964.1| | PREDICTED: meckelin [Chelonia mydas] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1.1_03331.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1.1_03331.t1 atgctatatcctctaagcaacagagttgcgaggggaaagcaattaatccatataactttggttgatttaggactcatagg aagctgggaattgagaagatcatggtatctaaagtacttgcttcaaggtattgcctttgacagttttatcgtgaactgga gatgtgccattactctacaaagtttaactttaaaacttgtcattgaggtagaagatggtataagatgtgtttgcaatgct gggtacagatatgtgagggattttggaaatgaaaacattaaatgtgaaaggtgtgcagcaaaccaggtgcgatcagaaga tggctacagttgtgttgcatgtacaaatgctacatgtgccagttgtccagcagggagaataggaggtgcaaccttgaata ctccatgtgacttgcacactgatatatctcagttggttgctggacagtggtcctccaccactcgtacaaaaccgtacctg ccatggctatattacttcagtagcagtttaagtatacgtgacggtgatcgtgttatcggagaggacgggttaaccacgtc ctatacgtttgatccaaaatcacagttcaagttcagggtcggcagatttacgctcaatggtacatatttgggtatatcaa acgtagggagtggattgctacagctgtgtacagatactacaaataaactggatgctgcatatacctttggaacatactac tctcacacatgtaccattccagctattgacctatgggacaggactcgatatcctctggagttctatgatttatctgatgg tgaaaatcagttatactatatacctatcagatttacagactttgagtttactggagataatgtgaatgcaggttccaatg cccaggattggtacatgacaagaaggctcttcttggttgataatgtagcttctactggagactcgggcacagctgatcaa ccacagtatgtgaggtatgccaggaacatagagattactgtccgcttgtttgattcactcggtaatggtcgtatttaccc tccatattggacagtatcgtatggggaaatatcaagagcagatgcagaagcaggagctacaataagtccgaccttcactg tgaaatactccatgagcctgagtgaataccgaaggaatttccagattgccacaggaacgttgtcaactcttggtgtgatc tatgccgggtataaaacctgggtgtggtctaagagggctggtagactagctattgactttgccagtatcgggaattttat tttcttcgtcagtggagtgctgtctaacgtcttctttgttataacgtttggtataggattctacttccttgttttcttca agaggcagagtacagtttatctattcctgttagagggtacagcatacgaggaatggctggggttgttcggagcagcattc gcccttaaggcattacaggtcatacacatggtcgtaacacagtgtatggttgatatattctttattgattgggaaaaacc taaaccaggtgtgagcaacaaaggagatcagaaaaaagaaaaccctgtatcaatatggaggacatattttgttgccaacg agtggaacgagcttcagacgtcacgtaaaatcaaccagattttccagatttttgccgtcgtatttttccttaattacatc ggctttgagaacgtggcaaccaaggatccgaatggtaaagtcgtcaaatctgatgaggattaccaggctgaccaggatcc ggtactgagatacgccatagcagctctcgtctatttacttgttgctgttgtacagtggatatttttcacctttgtttacg agcgttttgtctcggacaaggttcgtgactttgtggatctctgcgccatgagtaacataagcgtgttcatcatgcagcat gcccagtttggttactatattcacggtagatcagtacacggcaaggcagacacagatatgagggagatgtgtgatatgat taaaagagaggaggaggatttgtgtggaaaacgtggattagaggaagaccaggaggagcaaacatttgttatgtcgttac caaggaaactccgcttaaaatatgaggaagttttactgccagtcgctctagagaacatcggtggaggtgggccaggagct gccggaggaaagaaaggtggattgacagagaaacaagtggacgcttataatgtcatcaataaattcctttcctctttcat aaatcatagtttaaagagcctagactacgtagtgaaagacaagtctttactagaaaacgtcatggacacagaattcctcg acacgtcggagacgggtatattctataaagataatggtcattcctttgaccagtgtttattctacgggaatgaaatcacg ttattattgtttgacctccttctttttgtcatcgtggatcacatagccaaaaattttgtgatagctggagttattacata tcttattatagggtttgtagctttaataagagacgagggcggaaagagaaacttagcaaagaaaaccttagtggatgaaa gattcttaatataa |
|
Protein
| Protein ID | pfu_aug2.0_1.1_03331.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1.1_03331.t1 MLYPLSNRVARGKQLIHITLVDLGLIGSWELRRSWYLKYLLQGIAFDSFIVNWRCAITLQSLTLKLVIEVEDGIRCVCNA GYRYVRDFGNENIKCERCAANQVRSEDGYSCVACTNATCASCPAGRIGGATLNTPCDLHTDISQLVAGQWSSTTRTKPYL PWLYYFSSSLSIRDGDRVIGEDGLTTSYTFDPKSQFKFRVGRFTLNGTYLGISNVGSGLLQLCTDTTNKLDAAYTFGTYY SHTCTIPAIDLWDRTRYPLEFYDLSDGENQLYYIPIRFTDFEFTGDNVNAGSNAQDWYMTRRLFLVDNVASTGDSGTADQ PQYVRYARNIEITVRLFDSLGNGRIYPPYWTVSYGEISRADAEAGATISPTFTVKYSMSLSEYRRNFQIATGTLSTLGVI YAGYKTWVWSKRAGRLAIDFASIGNFIFFVSGVLSNVFFVITFGIGFYFLVFFKRQSTVYLFLLEGTAYEEWLGLFGAAF ALKALQVIHMVVTQCMVDIFFIDWEKPKPGVSNKGDQKKENPVSIWRTYFVANEWNELQTSRKINQIFQIFAVVFFLNYI GFENVATKDPNGKVVKSDEDYQADQDPVLRYAIAALVYLLVAVVQWIFFTFVYERFVSDKVRDFVDLCAMSNISVFIMQH AQFGYYIHGRSVHGKADTDMREMCDMIKREEEDLCGKRGLEEDQEEQTFVMSLPRKLRLKYEEVLLPVALENIGGGGPGA AGGKKGGLTEKQVDAYNVINKFLSSFINHSLKSLDYVVKDKSLLENVMDTEFLDTSETGIFYKDNGHSFDQCLFYGNEIT LLLFDLLLFVIVDHIAKNFVIAGVITYLIIGFVALIRDEGGKRNLAKKTLVDERFLI |
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