Gene
| Gene Model ID | pfu_aug2.0_1.1_03333 |
|---|---|
| Locus | scaffold1.1 : 406410 ... 421407 : + |
| To GenomeBrowser | scaffold1.1:406410..421407 |
| Genes list of scaffold | scaffold1.1 |
| Synonym | NA |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| nadh dehydrogenase complex assembly factor 6 | GO:0005634 GO:0005743 GO:0032981 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1.1_03333.t1 | 1 | 1 | SQS_PSY | 57 | 222 | 1.0e-32 | 113.5 | 1.6e-36 | 1.2e-32 | 113.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1.1_03333.t1 | gi|657553919|ref|XP_008281400.1| | PREDICTED: NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 isoform X2 [Stegastes partitus] | 0.0 |
| pfu_aug2.0_1.1_03333.t1 | gi|657553917|ref|XP_008281399.1| | PREDICTED: NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 isoform X1 [Stegastes partitus] | 0.0 |
| pfu_aug2.0_1.1_03333.t1 | gi|583993307|ref|XP_006791815.1| | PREDICTED: NADH dehydrogenase (ubiquinone) complex I, assembly factor 6-like isoform X2 [Neolamprologus brichardi] | 0.0 |
| pfu_aug2.0_1.1_03333.t1 | gi|560931813|ref|XP_006192033.1| | PREDICTED: NADH dehydrogenase (ubiquinone) complex I, assembly factor 6, partial [Camelus ferus] | 0.0 |
| pfu_aug2.0_1.1_03333.t1 | gi|471360494|ref|XP_004370817.1| | PREDICTED: NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 [Trichechus manatus latirostris] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1.1_03333.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1.1_03333.t1 atgactatgaaggatttctttgctcgttgttgtatcctacatttatcagaaatgcttcttttgcaatcagagctttcaat gtggaaacagcccaggttgaaatcatgtgatacaaaggttgaacatttgcagctgttaagccagcgtcatgatctagatt atttcaggatactcagaagacacagattaacaaagaggtggttccacagaattctggaggctagagctgacaaagtacaa aatagcagatacggcactattaatgatatggaggaatatagtgagaacaccatgtcatctctgatgtatttacacttaga gtgtctaggcataaagaatatcaagattgaacatgctgcaagtcatctggggaaagcacaaggtctagttacattactca gagctgccccctatatcggcaagtcagggaaggtttatctccccctggatctcatggcaaaacacaaagtatcccaggag gatgtactgagaggtcgtaaacaacaagaaatctgtgatatcgtgtatgagatagcgtgtgttgttatggagcatttgga caagtcaaaatcctttggtgaatccttacatccaagtgctgcacccctatttatacactcgattataatagaaagatact tgaaaaaattggagaaagctggatttttcatctatcacccatcattacaaaagaaagatggacttttgccgatgaagtta tggatacaaaaaattaggaagacccattaa |
|
Protein
| Protein ID | pfu_aug2.0_1.1_03333.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1.1_03333.t1 MTMKDFFARCCILHLSEMLLLQSELSMWKQPRLKSCDTKVEHLQLLSQRHDLDYFRILRRHRLTKRWFHRILEARADKVQ NSRYGTINDMEEYSENTMSSLMYLHLECLGIKNIKIEHAASHLGKAQGLVTLLRAAPYIGKSGKVYLPLDLMAKHKVSQE DVLRGRKQQEICDIVYEIACVVMEHLDKSKSFGESLHPSAAPLFIHSIIIERYLKKLEKAGFFIYHPSLQKKDGLLPMKL WIQKIRKTH |
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