Gene
| Gene Model ID | pfu_aug2.0_1.1_03334 |
|---|---|
| Locus | scaffold1.1 : 429000 ... 430945 : + |
| To GenomeBrowser | scaffold1.1:429000..430945 |
| Genes list of scaffold | scaffold1.1 |
| Synonym | pfu_aug1.0_15989.1_46929 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1.1_03334.t1 | 1 | 1 | 7tm_1 | 34 | 381 | 1.7e-29 | 102.7 | 6.5e-33 | 2.4e-29 | 102.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1.1_03334.t1 | gi|676432797|ref|XP_009046691.1| | hypothetical protein LOTGIDRAFT_171870 [Lottia gigantea] | 2.0e-30 |
| pfu_aug2.0_1.1_03334.t1 | gi|676430375|ref|XP_009045905.1| | hypothetical protein LOTGIDRAFT_237684 [Lottia gigantea] | 5.0e-27 |
| pfu_aug2.0_1.1_03334.t1 | gi|676445484|ref|XP_009050768.1| | hypothetical protein LOTGIDRAFT_239028 [Lottia gigantea] | 2.0e-26 |
| pfu_aug2.0_1.1_03334.t1 | gi|676474642|ref|XP_009060210.1| | hypothetical protein LOTGIDRAFT_229072 [Lottia gigantea] | 9.0e-24 |
| pfu_aug2.0_1.1_03334.t1 | gi|695138817|ref|XP_009511788.1| | PREDICTED: D(2) dopamine receptor isoform X3 [Phalacrocorax carbo] | 5.0e-17 |
Transcript
| Transcript ID | pfu_aug2.0_1.1_03334.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1.1_03334.t1 atgcgtaatctaacagctcttgaatggagtcatttgctgaggggagaaagggtgccacttattctggtcacattatttct gttcgtcataggttttacgggaaatttggctgttctggtggtatacaagacacgactgaagggtacacagggacgttttt tcatcccatttctagctgtggcagacctgtgtgccacgactgtcacttcgtctttcttgttacttttggacttcacggaa ggactttttccatcggatcaactctgcaagtttttacagttcttaaactggtcaacatcccaatgttctatattcctctt gtttgcaattgctgttcatcgatacttcagtgtatgtcgaccccacgacatgagatttacaagaaaaaagcaaaaggcag ccgtagttgcaagtgttgtttttgcgtatacgttcggtttaccattgctcttcttttccggaagattgacaataagtgtg acttataaaggcacaaacgtcactggacatggttgcacgttcaatcctggtcatgatgaattgggtgaagctgtctactt tcgaatcctttttataggaagcatcttactgctttgcatcatgactgctctctacgtcccaataggcaaagtcatttttc agaaatttagaggatcaagagaagtttcattaagtacgaagaataacgcatcgcgagtcacagaaactagtcaacatggc ccgtcaactgatagtaacaatgtgaccatagattcacaaaacttcacatcaaacgattccagctctctgcctgtcgataa aaactctaaggtgaaccttcatagcattgactcgataccatcgaacgaacaagaattctccatttcgtcttctgtttttc aaaaagaatatgtgtcgtctgcctcaaagaaatcacgaaaaaccaagagtatcaagggtggtgggcacaggagcaagttc acacttacattgatgttggtagtggtgttttacattgcatcctacattccattctacgttattgtgagcacaggtataaa tgacatggacgtttggtttaaccttccaccgtggaaactgaacggcagcctgttcttgtaccgctgttacatcatcaaca acgtcgtcaatccaatcatctatgggctgtttgactctacgttcagaaaacatcttcttggtttgtgttctagtgcagta cagcgaataagatatgtattcacctcttcaaaataa |
|
Protein
| Protein ID | pfu_aug2.0_1.1_03334.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1.1_03334.t1 MRNLTALEWSHLLRGERVPLILVTLFLFVIGFTGNLAVLVVYKTRLKGTQGRFFIPFLAVADLCATTVTSSFLLLLDFTE GLFPSDQLCKFLQFLNWSTSQCSIFLLFAIAVHRYFSVCRPHDMRFTRKKQKAAVVASVVFAYTFGLPLLFFSGRLTISV TYKGTNVTGHGCTFNPGHDELGEAVYFRILFIGSILLLCIMTALYVPIGKVIFQKFRGSREVSLSTKNNASRVTETSQHG PSTDSNNVTIDSQNFTSNDSSSLPVDKNSKVNLHSIDSIPSNEQEFSISSSVFQKEYVSSASKKSRKTKSIKGGGHRSKF TLTLMLVVVFYIASYIPFYVIVSTGINDMDVWFNLPPWKLNGSLFLYRCYIINNVVNPIIYGLFDSTFRKHLLGLCSSAV QRIRYVFTSSK |
|