Gene
| Gene Model ID | pfu_aug2.0_1.1_03338 |
|---|---|
| Locus | scaffold1.1 : 461940 ... 467606 : + |
| To GenomeBrowser | scaffold1.1:461940..467606 |
| Genes list of scaffold | scaffold1.1 |
| Synonym | pfu_aug1.0_3380.1_51975 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| cholecystokinin receptor type a-like | GO:0006812 GO:0007186 GO:0010033 GO:0043269 GO:0044708 GO:0044767 GO:0048518 GO:0048523 GO:0050804 GO:0050877 GO:0065008 GO:0071702 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1.1_03338.t1 | 2 | 1 | 7tm_1 | 9 | 95 | 2.7e-32 | 111.9 | 8.2e-08 | 0.00017 | 20.7 |
| pfu_aug2.0_1.1_03338.t1 | 2 | 2 | 7tm_1 | 107 | 422 | 2.7e-32 | 111.9 | 5.0e-30 | 1.1e-26 | 93.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1.1_03338.t1 | gi|585693712|ref|XP_006821679.1| | PREDICTED: cholecystokinin receptor type A-like [Saccoglossus kowalevskii] | 2.0e-11 |
Transcript
| Transcript ID | pfu_aug2.0_1.1_03338.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1.1_03338.t1 atggacttaaccccatcatcaacattgcagaagatgtcgcctgctaaaaagaaatcacggaaaaccaaaagtggtaagag cgggggccacaggagcaaattcacgctcactttaatgttggtagtggtgttttacattgcatcatacattcctttctatg tcattgtaagtactggaatcaatgacccaaacgtgtggttcaaccttccaccatggaaactgaacggcagcctgttcttg tatcgctgttacatcatcaacaacgtcgtcaatcccatcatctatgggctgtttgactctacattcagaaaacatcttct tgctgacctgtgtgccacgacagtaacttcgtctttcgtattacttatggactacacagaggctctgtttccatcggatc tgctctgcaaggtcttacagttcttgaactggtcaacatcacaatgctctatatttctattgtttgcaattgctgttcat cgctacttcagtgtatgtcgacctcttgacatgagattcacgaggaattggcagaaagcagccatagttgtgaccgtggt tttggcgtatagtatcggatcgccattgcttctcttctccggaagggtgacattacatataaactataaaggatcaaacg taaccggagatgtttgcacgttcaatccgggtcatgtcaaacttggtgaagttatttactatcgcatccttttcattggt aacatcttactgcttggcgtcatgacagctctttatattccaataggcaaagttattttccaaagatcgaaaggtgcgaa acaatctacatcgattgcgaaagaagctaagcaacaaatcaccgaatcaaacgaaagcgggcaatcaacagacagcatca aattgtccattgatttaaccaaagacataggtcctttgcccactgagaaaaactctgagccgaatcctaaaaacaacgat tcgacaccggaaaacaaaaatggaatatctattatatcatcggctttgagaaaaaggtcgtctgcctataaaacatcatt gaaaacaaaaaacggtaaacgcggaggtcacaggagcaaattcacgcgcacaatcatgttggtagtgttattttacattg catcgtacatcccgttttacgtcattgtaagtactggcatcaacgaccctaacgaatggttcaacctaccaccgtggaaa ctgaacggcaatcttttcctatatcgctgttacatcatcaacaacgtcgtcaatccaatcatctatgggctgtttgactc tacgttcagaaaacatcttcttggtttctgttctagttcagtacagaaagacaaaggtataaagtaa |
|
Protein
| Protein ID | pfu_aug2.0_1.1_03338.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1.1_03338.t1 MDLTPSSTLQKMSPAKKKSRKTKSGKSGGHRSKFTLTLMLVVVFYIASYIPFYVIVSTGINDPNVWFNLPPWKLNGSLFL YRCYIINNVVNPIIYGLFDSTFRKHLLADLCATTVTSSFVLLMDYTEALFPSDLLCKVLQFLNWSTSQCSIFLLFAIAVH RYFSVCRPLDMRFTRNWQKAAIVVTVVLAYSIGSPLLLFSGRVTLHINYKGSNVTGDVCTFNPGHVKLGEVIYYRILFIG NILLLGVMTALYIPIGKVIFQRSKGAKQSTSIAKEAKQQITESNESGQSTDSIKLSIDLTKDIGPLPTEKNSEPNPKNND STPENKNGISIISSALRKRSSAYKTSLKTKNGKRGGHRSKFTRTIMLVVLFYIASYIPFYVIVSTGINDPNEWFNLPPWK LNGNLFLYRCYIINNVVNPIIYGLFDSTFRKHLLGFCSSSVQKDKGIK |
|