Gene
| Gene Model ID | pfu_aug2.0_1.1_03343 |
|---|---|
| Locus | scaffold1.1 : 494980 ... 497069 : + |
| To GenomeBrowser | scaffold1.1:494980..497069 |
| Genes list of scaffold | scaffold1.1 |
| Synonym | pfu_aug1.0_141326.1_64533 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1.1_03343.t1 | 1 | 1 | DUF4371 | 116 | 234 | 8.3e-14 | 51.7 | 1.6e-17 | 1.2e-13 | 51.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1.1_03343.t1 | gi|585708735|ref|XP_006824225.1| | PREDICTED: zinc finger protein 862-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_1.1_03343.t1 | gi|585702780|ref|XP_006823127.1| | PREDICTED: uncharacterized protein LOC100368807 [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_1.1_03343.t1 | gi|736299645|ref|XP_010792626.1| | PREDICTED: zinc finger protein 862-like [Notothenia coriiceps] | 0.0 |
| pfu_aug2.0_1.1_03343.t1 | gi|734650525|ref|XP_010754595.1| | PREDICTED: zinc finger protein 862-like [Larimichthys crocea] | 0.0 |
| pfu_aug2.0_1.1_03343.t1 | gi|585720298|ref|XP_006813061.1| | PREDICTED: zinc finger protein 862-like [Saccoglossus kowalevskii] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1.1_03343.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1.1_03343.t1 atgtcaaagaaaagaaagactgacaccagtaactccacgttacttgcctggtttggagccccgtctactgctcagaaaga ggctgaatcgccgtctacaccaaagaaatcaagagtcagaaaatcaggattcaatccaaaatggatgtctgaatttcctt ggcttagccacgctgcagatgaagacggaatgctttgcacatactgtaaaaagtacggaatgcagccgaaaaatggatct gatgtttggataaagactccataagaaatagcccatacaacgcactttgcatccctcattgacctagccaagtccctggg ctgcgactaccttaatgcactgaaaaagggagacaacgtcaattataccagccaaagaacgatgcaagacatactccaat gtctcagtgagcagatccgcacgccaatacttgacgatctaaaggagagcagatatttctctctgcttatagacgagaca acagacatagctgtcctcaaacagatgactattttagtcagaattttgaaaagtgagcctaagcctaagcttcatacgca tttcctctgcctgaaagacttgcctgatgggaaagcagataccataatggccgcattgaaaactttctttgccgacaatg agataccaacaaggaagctgattggactggggtctgacggagcatctgtaatggtcgggaggaaaacaggggtagccacg cagctaaaatctaccaaccctgagctgatcaacgtgcactgtattgcccatagactggccctagcctccgcccaggcagc tgatgcagtcccatacctgaagaagttcaaagccatcctccagcagatgttcaaattttaccagaactctgctgtgcgca tggccggcctcaaggagatcgagtcaatacttggagacccagctgtaaagctgagggagatagcagacactagatggctg tcccatgaaaacgcagtcacagctataatacgttgtcttccctctcttattacaagtcttgagagggaagcatcagagag gatggacgccacagcagccggtcttgcaacgtttgtaaagcagccaacattcatctgcagtatagcaatgttgtcagacg tacttccacatctctccaggctatccaaggcgtttcagaggaccagtgtcgacttcacaatgattgacacccttgtctca gcaacccagatgaccttgatgcggatgaaggtagcccctgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnatgcttatttatga |
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Protein
| Protein ID | pfu_aug2.0_1.1_03343.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1.1_03343.t1 MSKKRKTDTSNSTLLAWFGAPSTAQKEAESPSTPKKSRVRKSGFNPKWMSEFPWLSHAADEDGMLCTYCKKYGMQPKNGS DVWIKTPXEIAHTTHFASLIDLAKSLGCDYLNALKKGDNVNYTSQRTMQDILQCLSEQIRTPILDDLKESRYFSLLIDET TDIAVLKQMTILVRILKSEPKPKLHTHFLCLKDLPDGKADTIMAALKTFFADNEIPTRKLIGLGSDGASVMVGRKTGVAT QLKSTNPELINVHCIAHRLALASAQAADAVPYLKKFKAILQQMFKFYQNSAVRMAGLKEIESILGDPAVKLREIADTRWL SHENAVTAIIRCLPSLITSLEREASERMDATAAGLATFVKQPTFICSIAMLSDVLPHLSRLSKAFQRTSVDFTMIDTLVS ATQMTLMRMKVAPXXXXXXXXXXXXXXXXXXAYL |
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