Gene
| Gene Model ID | pfu_aug2.0_1.1_03344 |
|---|---|
| Locus | scaffold1.1 : 497164 ... 534719 : - |
| To GenomeBrowser | scaffold1.1:497164..534719 |
| Genes list of scaffold | scaffold1.1 |
| Synonym | pfu_aug1.0_16527.1_54312 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| ubiquitin-protein ligase | GO:0003824 GO:0005488 GO:0008152 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1.1_03344.t1 | 2 | 1 | E3_UbLigase_EDD | 177 | 202 | 2.8e-36 | 122.7 | 3.1e-06 | 0.023 | 14.2 |
| pfu_aug2.0_1.1_03344.t1 | 2 | 2 | E3_UbLigase_EDD | 209 | 260 | 2.8e-36 | 122.7 | 2.5e-36 | 1.9e-32 | 110.5 |
| pfu_aug2.0_1.1_03344.t1 | 2 | 1 | zf-UBR | 1157 | 1218 | 1.4e-07 | 31.0 | 1.9e-11 | 1.4e-07 | 31.0 |
| pfu_aug2.0_1.1_03344.t1 | 2 | 2 | zf-UBR | 1251 | 1267 | 1.4e-07 | 31.0 | 0.049 | 360.0 | 0.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1.1_03344.t1 | gi|242013030|ref|XP_002427224.1| | ubiquitin-protein ligase EDD1, putative [Pediculus humanus corporis] | 0.0 |
| pfu_aug2.0_1.1_03344.t1 | gi|498932867|ref|XP_004519491.1| | PREDICTED: E3 ubiquitin-protein ligase hyd isoform X1 [Ceratitis capitata] | 0.0 |
| pfu_aug2.0_1.1_03344.t1 | gi|498932869|ref|XP_004519492.1| | PREDICTED: E3 ubiquitin-protein ligase hyd isoform X2 [Ceratitis capitata] | 0.0 |
| pfu_aug2.0_1.1_03344.t1 | gi|195400289|ref|XP_002058750.1| | GJ11179 [Drosophila virilis] | 0.0 |
| pfu_aug2.0_1.1_03344.t1 | gi|751466336|ref|XP_011188197.1| | PREDICTED: E3 ubiquitin-protein ligase hyd [Bactrocera cucurbitae] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1.1_03344.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1.1_03344.t1 atgacatctatccattgtgtcgtccatcctcttcctgggactgatacacaactaaatgacagactaagggaagtagcaga aagaataagtcatcatggatttaccagcccctcagccttctctactcttaccaacacaacagtcgtacaatgtgtgatcg gacctaacttcatagcattcttgttagaggatggaagagtgtgtcgtatttcatactctgtggccgcagaaaagttggac ctgaacaaagcagaaaataaagcaactctgaagacgagtcgaccagagaggagcgagagaacaacgattccctcacgtac caccacgcaggctgtagaaagtccccttgttctcgtatctgatgtgctaggcacggccggagagcaagcagctggacgat ggggagctacgactgtgtccactgtagctaccactaggagtagtaaccagccagcgtatagtcgtatgcaacgtgctgta catgtcagtcgtggtagacggtcaggggtcatcgtaggcacacgaccacttgttcctgcctcagtggtcccagaggaact tatcagtcaggtatgtaatattagtcatagtagacagtcaggggtcatcgtaggcacacgaccacttgttcctgcctcag tggtcccagaggaacttttcagtcagtgtcaagttgtcctgcaaggaaaatcaaggaatcttataatcagggaattacaa aggacgaatcttgatgtaaatttggctgtgaacaacctgcttagtcgggatgacgagggggagggtgatgacgatgatag ccaggattcctacatgccagaagatcttatgtctctgttagatagcggcatgcatactgccgatcatcccggcgttatca tcgatgccgagaacatgttcaccaacgaggacgtgttcgggtactcgtccatcaggagtaggtcgtcaggcacacggtct agattaggtactgtcacacatcttttaaaattatatgtatatacacatgtgcatgatggtgtaggtacaaagttttccca cattgccgctatgcattctgaccttgttgctgtgggaaccaacggtcagctgtatagctggaagtggagtgatcctgaac cattccggaatccagacagtacaaacctgcatcaccctaaggccgtgtctctaggtctacagaatgagaagattgtgggt atatctgcctgtagtatgagagcctccgtctttacggagtctgacaaagtggcaacctgggtcgatgagacgcttaatag tgtggcatcaaaactagagcaggcagctcagagctttacagagttccagactgataagattgtgtcgttacatacatgtt ctctgtacacatgtgccagactggaaagtggtgctttatattggtgggggatcatgccttttggacagaggaaaaagatg ttagagagaacaaaatccaaaaagaagaaaggaaaagatagtacattagcctcatcaggagatatcgtcagtggatcatt ggtatgtttgaggagttcgcctatgtaccacagtggtgctatagcgtttgccaccattgacggtgtaccgaaagtaggtc aactactggagtctgcttggtcacttgccgatacatgccgatttaaaatcatgaaaactactccagttgaagtaaaacct gagccaagacctgagaccaagcagagtgagatcaaacctgagatgcccccacccccgtcccctgacagctctacgtgtag tgatcacagcggtcccaccctcatcagtcctgcctcactcaagagaaagaaagctccaacacccatcaaagacgtggaga aaaaagacgaggagaattggcccctgaagaatgtaatatttgtagaagacgtgaagactgtacctgtcggtaaagtatta aaggttgatggggcatacgctgccgtgaagttccagaccaaggattcggagggcggagttagtaaggaggacccggctag cttactacaagactgcagactgatgagaaaggacgagttacaggtagtgaagagtgccagtgcccccagactgccagact gcttccagaaaaatcctaaaaaagtaacattatcagaaaatgggcaaatattagctgtggctgtagattgtgaaggtatc catgtgatagcgaggtccggagcacgacttagttatatagtatataacctgacgtcagggaaagtagagcaggattctgc cttccctacggatgcccagtcgtttatgggtgtacatagacgggaaatctctctatgtaaaacagaggaggagttactgc ttcagttaagggacggtaacgggtctatatatcctttagccaaggattgtgttgagggcatacgtgacccaatgtggtta aatctacctcccgtcaggtgtatcggaatgaaggtccacagtcttggtaaccaaggaaacaacatgaaaaataaggcagc tgtcattgttatggctgtagagcatcaaatcattgtacctcatatactgagatgtgatgtagagaaagtcggttctattc tcaagtctttagagaatgatcaagctggtacctcgacatccacagcacagcccttgaagactttacaggagatactgagg gaacactgtgatggcaatcgtaacataatacacacagtgagtttgagggagatgatgagacgagcgtccagtgcggctcg agtggtcagtggaatggacatgagggatccagaccgagatgaccccggcatggccataccaacactaacatggccccctg aacacccgcctaactacgagtctatacatgctgatctgaatctatcccaccctccctccacctccagtacgggacctctg atgacaggagagttcagctctgtgtcaatgccgccagttaaaatggaggagaaggaacgccggtcgtcagccatgcagat cattaagcttctgtgtgaatctacggctttacaacctcatctcaaagatctactgtctgccagagccgatcttagcaaca taataaatgattttgatggaagtacttccggcttttccgatctgaatctatcgcaccctccctccacctccagtacggga cctctgatgacaggagagttcagctctgtgtcaatgccgccagtaaaaatggaggagaaggaacgacggtcgtcagccat gcagatcattaagcttctgtgtgaatctacggctttacaatctcatctcaaagatctactgtctgccaggaacgcggaag gctgtactccgtttatgcaggctattaggggatgtgcatacgcagcagccttacttattctggactctgctaagaaagtg tcgaccaacgacaagggagagcaggacagggggatgttaatgagtatgttataccccacaggatcgagtctcgataactc ccctctacagatgctgtgttgtaacgacacctgtagcttcacatggacgggcagggatcatatcaaacaggatatatttg agtgtaagacgtgcggactgacagggtctctatgctgttgtacagaatgtgcacgagtgtgccataaaggacatgactgc aagatgaagaggacgtcacctacagcgtattgtgactgctgggaaaaatgtaagtgtaaagctctgatagccggacaaca aggaccaaggtttgagctcctacatcgactgttaacagaaacggatctagtcgtcctacctaacagcaggatgaagagga cgtcacctacagcgtattgtgactgctgggaaaaatgtaagtgtaaagctctgatagccggacaacaaggaccaaggttt gagctcctacatcgactgttaacggaaacggatctagtcgtcctacctaacagcaggggagagaatatactattattcct cgtacagacagtgggaagacaacttatagaacaaagacagtacagacctaataacaggacacgagtacccgtgcccagta ggaaaaatatacctcaggatcttgatgtagaaatgccagaacacgacttagaacctcccaagttcagtcgtaaggcgtta gaacgtatcctaaatgattggacggcagttaaatcaatggtgatgagtggcagtaaagatagcagtgctagttccccaga tgttgtctatgaggatcagttgtacttggacagtcagagtggctcagggaggctggacaaatttacacacaacctcctgg tcaaatgtagtgttgagatgctggacacattgttgacgactttgatcagagagatgcagaacgagaacatagaagggagg aagtcagaggccaagcaggtggcacgaagatttatacgatctgtggccaggatttacgtcgtaatcaacgtagggatggc accagccacaggcaaaaagaaaagtgctagtataacaacctgccagcctgtgatcagatgtaagcgagcctttcaggccc tcattaacatcgccctggaggagctgtgtgaaatagccgactccctgatagctccggtcaggatgggtgtgtcccgcccc actgcgcccttcaccctggctgtggctaatgtagaggccatacaaggcagtgaggagatttttaatactgaccccctacc ccccaggaataatacgtctgacctagagacaaggtctgtagcgtttatatcgcaggaacgattagctcagacccagcagt ccagtcagagagcgacagataggggtgacgatgaaatgatgtcagctgacgtagaggagggtgaggtggtggaaggcatt gtaggtgacgaccaatcagatcacgaggatagggaggaccaccaatcagagcactccgatcaagatcatgctgataatga agcaggtaatgctgagagtgacatggatctagatttactcgccgagtccgactcggactcggacagtgatggaggtcaca gtaaccaagacaacgtcagtgtacagaggagtgctgttactgcggcaacagctggctcagatgctggtacaggccttggt agtctggcacatttctctgaagattccggggaatcatctaatcaggaagatgattatgagagtgacaacgatcgtagcga ggacggaaatgatgccgacgacatgcattatatagatgaacaactagaaagatgtaatacgtcaagtactcatggtcaga ggacgttacaggcccctcagacgatgcagtgggcgataaggtcacgggaccctccctcctccagaccaccacctgctgca ggggctaatactacttcaggtatgtcatgtacttggttaaaattacattatttatttgtacttattgtacatgtcagtgt tctccccagaaatttcagatag |
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Protein
| Protein ID | pfu_aug2.0_1.1_03344.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1.1_03344.t1 MTSIHCVVHPLPGTDTQLNDRLREVAERISHHGFTSPSAFSTLTNTTVVQCVIGPNFIAFLLEDGRVCRISYSVAAEKLD LNKAENKATLKTSRPERSERTTIPSRTTTQAVESPLVLVSDVLGTAGEQAAGRWGATTVSTVATTRSSNQPAYSRMQRAV HVSRGRRSGVIVGTRPLVPASVVPEELISQVCNISHSRQSGVIVGTRPLVPASVVPEELFSQCQVVLQGKSRNLIIRELQ RTNLDVNLAVNNLLSRDDEGEGDDDDSQDSYMPEDLMSLLDSGMHTADHPGVIIDAENMFTNEDVFGYSSIRSRSSGTRS RLGTVTHLLKLYVYTHVHDGVGTKFSHIAAMHSDLVAVGTNGQLYSWKWSDPEPFRNPDSTNLHHPKAVSLGLQNEKIVG ISACSMRASVFTESDKVATWVDETLNSVASKLEQAAQSFTEFQTDKIVSLHTCSLYTCARLESGALYWWGIMPFGQRKKM LERTKSKKKKGKDSTLASSGDIVSGSLVCLRSSPMYHSGAIAFATIDGVPKVGQLLESAWSLADTCRFKIMKTTPVEVKP EPRPETKQSEIKPEMPPPPSPDSSTCSDHSGPTLISPASLKRKKAPTPIKDVEKKDEENWPLKNVIFVEDVKTVPVGKVL KVDGAYAAVKFQTKDSEGGVSKEDPASLLQDCRLMRKDELQVVKSASAPRLPDCFQKNPKKVTLSENGQILAVAVDCEGI HVIARSGARLSYIVYNLTSGKVEQDSAFPTDAQSFMGVHRREISLCKTEEELLLQLRDGNGSIYPLAKDCVEGIRDPMWL NLPPVRCIGMKVHSLGNQGNNMKNKAAVIVMAVEHQIIVPHILRCDVEKVGSILKSLENDQAGTSTSTAQPLKTLQEILR EHCDGNRNIIHTVSLREMMRRASSAARVVSGMDMRDPDRDDPGMAIPTLTWPPEHPPNYESIHADLNLSHPPSTSSTGPL MTGEFSSVSMPPVKMEEKERRSSAMQIIKLLCESTALQPHLKDLLSARADLSNIINDFDGSTSGFSDLNLSHPPSTSSTG PLMTGEFSSVSMPPVKMEEKERRSSAMQIIKLLCESTALQSHLKDLLSARNAEGCTPFMQAIRGCAYAAALLILDSAKKV STNDKGEQDRGMLMSMLYPTGSSLDNSPLQMLCCNDTCSFTWTGRDHIKQDIFECKTCGLTGSLCCCTECARVCHKGHDC KMKRTSPTAYCDCWEKCKCKALIAGQQGPRFELLHRLLTETDLVVLPNSRMKRTSPTAYCDCWEKCKCKALIAGQQGPRF ELLHRLLTETDLVVLPNSRGENILLFLVQTVGRQLIEQRQYRPNNRTRVPVPSRKNIPQDLDVEMPEHDLEPPKFSRKAL ERILNDWTAVKSMVMSGSKDSSASSPDVVYEDQLYLDSQSGSGRLDKFTHNLLVKCSVEMLDTLLTTLIREMQNENIEGR KSEAKQVARRFIRSVARIYVVINVGMAPATGKKKSASITTCQPVIRCKRAFQALINIALEELCEIADSLIAPVRMGVSRP TAPFTLAVANVEAIQGSEEIFNTDPLPPRNNTSDLETRSVAFISQERLAQTQQSSQRATDRGDDEMMSADVEEGEVVEGI VGDDQSDHEDREDHQSEHSDQDHADNEAGNAESDMDLDLLAESDSDSDSDGGHSNQDNVSVQRSAVTAATAGSDAGTGLG SLAHFSEDSGESSNQEDDYESDNDRSEDGNDADDMHYIDEQLERCNTSSTHGQRTLQAPQTMQWAIRSRDPPSSRPPPAA GANTTSGMSCTWLKLHYLFVLIVHVSVLPRNFR |
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