Gene
| Gene Model ID | pfu_aug2.0_1.1_03349 |
|---|---|
| Locus | scaffold1.1 : 659248 ... 684772 : + |
| To GenomeBrowser | scaffold1.1:659248..684772 |
| Genes list of scaffold | scaffold1.1 |
| Synonym | pfu_aug1.0_19794.1_11259 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| hormone receptor 4 isoform x2 | GO:0005488 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1.1_03349.t1 | 1 | 1 | Hormone_recep | 675 | 851 | 2.0e-07 | 30.3 | 2.7e-11 | 4.0e-07 | 29.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1.1_03349.t1 | gi|676463329|ref|XP_009056562.1| | hypothetical protein LOTGIDRAFT_120003 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_1.1_03349.t1 | gi|665799610|ref|XP_008547728.1| | PREDICTED: hormone receptor 4-like isoform X2 [Microplitis demolitor] | 5.04467e-44 |
| pfu_aug2.0_1.1_03349.t1 | gi|665799608|ref|XP_008547727.1| | PREDICTED: hormone receptor 4-like isoform X1 [Microplitis demolitor] | 5.04467e-44 |
| pfu_aug2.0_1.1_03349.t1 | gi|665799614|ref|XP_008547730.1| | PREDICTED: hormone receptor 4-like isoform X3 [Microplitis demolitor] | 7.9874e-44 |
| pfu_aug2.0_1.1_03349.t1 | gi|752874007|ref|XP_011254307.1| | PREDICTED: hormone receptor 4 isoform X2 [Camponotus floridanus] | 2.99878e-43 |
Transcript
| Transcript ID | pfu_aug2.0_1.1_03349.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1.1_03349.t1 atggattccagtgtcaagattccgaggaacagtctgttttacaatctgaaactgaagagagatcgtcacaagtgtctatc tccgagtgagacggaaagcatgaacagtgaaccgtacagcaaatataacaaataccgagaggaagttgaattcagtagtg atgtaggggtggatagtgattatggcagttctgcatccacaggtagggtagaggaccgtcaggggcatcgacaacactcg tacacaggattgtcgaataaggtcccctttaagaactattcctccaagtccagtggttactattctgaaacagatgtatc cagctccgatactgagcagagcgatgtgccattctctttcaaaaaaaggatggctggtttaatgtcggcatcatcaaatt catcgtctactgttggaggaccttctacccctgtcagtaataatgagcccccaaaagctagaagctcctcacctgacaag gagggtcagctacccaagggaatggcatatgttggtttccccccaaacatcttctttaatttacaaaatcaggaggaagt ggctaagaatggtcagaaatcggtccctataggatttttctccataatgtctagcatgtctgctggaggcaccccacagt tctttgtggctcagatgccggagggagctcggtttatgactccgatggcacaaggtccattccctccatcaaatactaat gtaggatcgaagatgccgcaggccaagccagttggtgggacacagctaaataccgcttgtaatactacaaatggtaatct gccgacacccacccctacaaaggagagcgagtactcattcatcaaccactacacaaatggagagtttgagtataatggta gaagtgagcatatgaggccgaatcagaaacataacgggatgagcgagttgagacgtcagctgacagggtctcccatggag gttgggaacggaatgagatgtgaacaaacaaatcttggaacatctccatatatgcctcctggacctgacggacaaaaatc atcctgtgtaggtatcagtgctttacaagaaatggagcaccgattacaaggtaccccagagtcatcggttgctagttctc accgaaaccgctacgaacaagagcatgtaagtaggtgtcagagtggtgaagaaaatcattctcgctcatttgattctaat attggactaacggcagaaaatttgtctagtgaaatgagacaggagatgatacgtatggctagaactgaaaactcagagac tttcatatcggaaaatgtgtcacaatggcaaaataatcagttgcctcctcctaatggttttcagcagaaaactaagtttg atggtgagacagatagagataatccctacttacattcaccagatttagtgtcaaaaggccattcccaaataagtcagaat gtcggacaaagtgaaaatcaaagatactctgaaaggggtgtaccgaacaaaaaatcttacatgtcacaagccgtgcccgc acgtcacatgacatcattacactcccccagtcttataggtaatcagacattgatgccaaatgaaaatgtaaaatctcact tacatgtttctgaaaatggttttgtaccaagtaacgtcaaatcaccgtcgatgcttcacacccaacatggttatgaaaga gtagaatctccaaagaatggcattgttgacaattcagtgatggaaaaattgaaggaaaacttatctctcagaagtggttg tcaggaaacggggggaagttccaaagatgtgtcatcttatagtgttactagaggtgaaaaacataacatgaatgaactta caagtgctcacctccaggcatggcaaatatctagacttgaaagggaatccccaagaaaatttattgaaaattgtcatttg tccatcgttggtgagttacttaaatgtgggtcacatctggaaatctcaaattgttataatctagaggacctatgtcattc agactctgaagtgacagagaaattatgtcgtctcggtgacaacatcgttgaaaaacttgtaaattggacaagaaatctgc ctttctatgaggaaattccacaagagactcgttctcaggttctagtgaacaagtggcaccccctgttggttctgatcact acggtacagaaggcacttcaggccggcagcgacacccagctttctcacttcacagatctacaccagtgtaacatggcact cctggacaagtatttgtcacgtatgttcagtgagacgtatgacccgtccctcatcaccaaagacgtgcggaatgttatgg agaagattacacacctgatgtggacctttatgtacatggggttaaggagggaggagtatgtctgtctacaagccatatta cttatgggagatgttgacctgtgcgtcatcttgagtcagattcagcagaggtttaaagcggccttacaatatctagtgtc gaggttacacccccaccaacctcaccgattctcacaactcctactacaacttacagagatcgagacggcatctgccatgc ttctctccagcaaaatgatctacataccgtttttcttgaatgactgcaatccagtcatgtaa |
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Protein
| Protein ID | pfu_aug2.0_1.1_03349.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1.1_03349.t1 MDSSVKIPRNSLFYNLKLKRDRHKCLSPSETESMNSEPYSKYNKYREEVEFSSDVGVDSDYGSSASTGRVEDRQGHRQHS YTGLSNKVPFKNYSSKSSGYYSETDVSSSDTEQSDVPFSFKKRMAGLMSASSNSSSTVGGPSTPVSNNEPPKARSSSPDK EGQLPKGMAYVGFPPNIFFNLQNQEEVAKNGQKSVPIGFFSIMSSMSAGGTPQFFVAQMPEGARFMTPMAQGPFPPSNTN VGSKMPQAKPVGGTQLNTACNTTNGNLPTPTPTKESEYSFINHYTNGEFEYNGRSEHMRPNQKHNGMSELRRQLTGSPME VGNGMRCEQTNLGTSPYMPPGPDGQKSSCVGISALQEMEHRLQGTPESSVASSHRNRYEQEHVSRCQSGEENHSRSFDSN IGLTAENLSSEMRQEMIRMARTENSETFISENVSQWQNNQLPPPNGFQQKTKFDGETDRDNPYLHSPDLVSKGHSQISQN VGQSENQRYSERGVPNKKSYMSQAVPARHMTSLHSPSLIGNQTLMPNENVKSHLHVSENGFVPSNVKSPSMLHTQHGYER VESPKNGIVDNSVMEKLKENLSLRSGCQETGGSSKDVSSYSVTRGEKHNMNELTSAHLQAWQISRLERESPRKFIENCHL SIVGELLKCGSHLEISNCYNLEDLCHSDSEVTEKLCRLGDNIVEKLVNWTRNLPFYEEIPQETRSQVLVNKWHPLLVLIT TVQKALQAGSDTQLSHFTDLHQCNMALLDKYLSRMFSETYDPSLITKDVRNVMEKITHLMWTFMYMGLRREEYVCLQAIL LMGDVDLCVILSQIQQRFKAALQYLVSRLHPHQPHRFSQLLLQLTEIETASAMLLSSKMIYIPFFLNDCNPVM |
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