Gene
| Gene Model ID | pfu_aug2.0_1.1_03352 |
|---|---|
| Locus | scaffold1.1 : 718019 ... 726837 : - |
| To GenomeBrowser | scaffold1.1:718019..726837 |
| Genes list of scaffold | scaffold1.1 |
| Synonym | pfu_aug1.0_8005.1_53075 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| lim homeobox protein awh-like | GO:0007444 GO:0010468 GO:0046872 GO:0048749 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1.1_03352.t1 | 2 | 1 | LIM | 34 | 90 | 4.3e-29 | 100.3 | 1.4e-16 | 3.6e-13 | 49.3 |
| pfu_aug2.0_1.1_03352.t1 | 2 | 2 | LIM | 95 | 151 | 4.3e-29 | 100.3 | 6.7e-19 | 1.6e-15 | 56.8 |
| pfu_aug2.0_1.1_03352.t1 | 1 | 1 | Homeobox | 195 | 251 | 9.8e-19 | 66.7 | 6.8e-22 | 1.7e-18 | 65.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1.1_03352.t1 | gi|676482990|ref|XP_009062879.1| | hypothetical protein LOTGIDRAFT_195071 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_1.1_03352.t1 | gi|291240697|ref|XP_002740254.1| | PREDICTED: LIM/homeobox protein Awh-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_1.1_03352.t1 | gi|642915212|ref|XP_008190523.1| | PREDICTED: LIM/homeobox protein Awh isoform X1 [Tribolium castaneum] | 0.0 |
| pfu_aug2.0_1.1_03352.t1 | gi|642915214|ref|XP_008190524.1| | PREDICTED: LIM/homeobox protein Awh isoform X2 [Tribolium castaneum] | 0.0 |
| pfu_aug2.0_1.1_03352.t1 | gi|498960255|ref|XP_004524609.1| | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1.1_03352.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1.1_03352.t1 atggttcatggagataatgggagagagagtgtgtgtgagggtgtgagagagagagagagagagagagagagaacaattct acaatctgacggtgacctatgcagtggatgtggtgaccttataactgaccgattcctcctgcacgtgaatggtcaatcat ggcacgtgggctgcctacgctgcagtgtgtgtcagatcggtctagagtatcaacagtcgtgttttattaaggaggacgcg gtctattgtaaactagactattccagacatttcggcactaaatgttccaagtgtctccggtctatacaggccacagactg ggtgaggagagccagggacaatgtctaccacctagcgtgttttgcctgtgatagctgtaagaggcagttgtccaccgggg aagagttcgctctacagggggagagagtgctgtgtaaaacacactatgtagaactattggagggagggcccaataaagga ttctgccacttcactgcaaaaagctacttgaatactaaaactaacggcatcgacttgatttcctatgatacagattcaga cagcagtcaaaaatctaaagcaaaacgagtgagaacaacattcacggaggaacaactacaagttttacaagccaatttcc agttagacagcaaccctgatggtcaagatctggaaagaatagcacaaatcacaggcctcagcaaaagagtcactcaagtt tggtttcaaaattcccgcgcgcgccaaaagaagcagacacagcatggtccagacgatgatggaagtcccttatcacattc tccgcaatctaaacctccgagcccaggacattggcttaacggttcagacagtcagaacagtgataatttctctttctcag aatga |
|
Protein
| Protein ID | pfu_aug2.0_1.1_03352.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1.1_03352.t1 MVHGDNGRESVCEGVRERERERERTILQSDGDLCSGCGDLITDRFLLHVNGQSWHVGCLRCSVCQIGLEYQQSCFIKEDA VYCKLDYSRHFGTKCSKCLRSIQATDWVRRARDNVYHLACFACDSCKRQLSTGEEFALQGERVLCKTHYVELLEGGPNKG FCHFTAKSYLNTKTNGIDLISYDTDSDSSQKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQV WFQNSRARQKKQTQHGPDDDGSPLSHSPQSKPPSPGHWLNGSDSQNSDNFSFSE |
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