Gene
| Gene Model ID | pfu_aug2.0_1.1_03356 |
|---|---|
| Locus | scaffold1.1 : 850843 ... 892257 : - |
| To GenomeBrowser | scaffold1.1:850843..892257 |
| Genes list of scaffold | scaffold1.1 |
| Synonym | pfu_aug1.0_10812.1_17681 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1.1_03356.t1 | 2 | 1 | G8 | 34 | 140 | 4.8e-24 | 84.5 | 3.7e-26 | 1.4e-22 | 79.8 |
| pfu_aug2.0_1.1_03356.t1 | 2 | 2 | G8 | 1139 | 1162 | 4.8e-24 | 84.5 | 0.05 | 190.0 | 1.8 |
| pfu_aug2.0_1.1_03356.t1 | 2 | 1 | Glyco_hydro_16 | 1183 | 1210 | 1.2e-06 | 27.9 | 0.0031 | 12.0 | 5.1 |
| pfu_aug2.0_1.1_03356.t1 | 2 | 2 | Glyco_hydro_16 | 1234 | 1264 | 1.2e-06 | 27.9 | 2.1e-07 | 0.00078 | 18.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1.1_03356.t1 | gi|676448877|ref|XP_009051872.1| | hypothetical protein LOTGIDRAFT_114783 [Lottia gigantea] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1.1_03356.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1.1_03356.t1 atggggaccgcagtccaatgtcctcatgaggtatcgggattgtccagctggtctcaagattcatcccttcccaacagtgc gagcgtcagtgcagatctagatgtgactattagtgggtcagtgctgctggacacatcccctccagaattcggtggtctga ctatcgcctctgggggacggctagtggtcagtccttccacggccacgcccatcatcctcaaggtcaaatacatccacatc ctgggtagaatggacgtcggatcagaagaatgtccctttaatggaaacctggaaatcattttgaagggtattaagggatc ctacaacatacaaggtatgggagagaagttcataggggtgggtagcggcggtactctggagatacacggtgctaggaaga cgtcttggacaaaactctcacagactatccctaaaactctggattccgactatatatttaaacattcagtggatggagat cagagttataactgggtacagggtgttaatatgtacacattcaatcccacaaactcctctgacttcacctacaaggctta ttacctaagtgggaatccaggacaagactggtggaataacaaaggacgaactgaatttattgccgatgtgcagaatattg ccacagggcatttcgtgatgatgtcagttttgtattccatgaaacacccaagctccaccactgacatgtctaccgtttat aacgccatggaaactgccttctttggaagcgtgacaggacaaagtattttccgaacgctccaacacagggacgcttatgt tctctttgcgtcaaaaggagatacctcctctgttgaagaaatcgtgactagagaaaatactgcaaagcaatcccaaactg ccgaatttagctttaccgattgggcgaatgacgtcaaatattacgttaaaagtctcgtggacaacgtaaacacgtgggca gctaagactgagtatactcttacgcctactaatattgcatatcctgttattaacgtcatagatgaccttgagaactggaa cgaaggtgatactgttttctgtacatcaactgattacaacatggaacaagcagagatagcacggattgttgcatgtccaa catgtacttctaagcagttcagggtagaaagtacataccctcttcatttccacatgtgcgaggatgtcagaaactacaca taccctccatatctgaaggataattcaatccacgacagtttcgcacgttgtgttacaatccacgggacagatggtgtctt ggtccaagacaacgttgcattagatatacttggtcactgttactttctggaggatggcggagaaaaatacactacatttg acggtaaccttggcgccgtagtacgagaggcttccttgacgccgtctgatagtagtccaactgtattttggttgaccaat ccattgactacaactataaacaacgttgctgctggagcgcatactggattttggttcatatttccaagagagcctattca gctctccgccgggttaggctttatgacatgggcaaatcagacagccattaccaaaacggacaacaatgtggcacactcat gctctgcgaatggactattcgttgacaacctgctgacatcagatagtgatataaccggaaacaacgagtatggtcctaaa gtggaacctggcaataataactctccggacaaacttgtcgtatttgatcgatttacaggctacaagatccgaagtagggc agtatggattagaggaggattccttaaggttcatagagcatcttctcgatccggtgagcagttcctcactaacagtgtgg ttttaggagagtcggctctgaacctgggtgagcctgactacgcatggatcaataataataaacttttctatccacggtca tatccggcatattggaatgatcagattcccagacaaggatttgctttttatgacggaccggtatatgtggaaaatgtatg gttcaatcgctttaagagcacagagaactatactatgggagctatatcgtttcatagaaacaacgtcttctggaacgcac ccaacagtgcagcgagaaatgtccagttcggctttgacgatgggcctacaacaggaaaccgtgtgtttgatggatttgaa gaggattatgggtattccaatgaagacggagacaaaggagcaacatttatatatgaagatataaacaaacaagttgtgaa gccttttcctttctatgtaacagattcatgtacgtacagatttcactggcagatggccctgtgcccacacaaatacggaa agctgaatgttagagtaactgcaatgggtcccggagagaccaggtctgaactggaaatgagacgagatgatatacccaca gaggaggaaacactgacaggggagagatcggggcaatttatggcaatcctcggagggactcattcctatacactacactg gcaaggcaatatacccaaagagttctacatctatggggacggtatagaaaaagactaccctgttcgattaggcatctgca ttccaaaacaggcaacatttaatttatattcctactctccaaaatggcgaccaaataattcctcctggacaagagtgtac actattggagaggtggacagccatcctgatggccaaaattatctctatgatgaaaacaaggggttactctttgttaagtt tgtgagtctgaatactcgtggaccaggaatcaccgacacgtgtaatggtacctgtcccatgcttagggtcagtataacat ccggggaccggaccgtggggtcatgctactcagacgcttacccaacctatcaacgtaccgcaacattgaccggtttcctt caaaacgatacaacatcatatcccaagacatccgtatctccacctgctacatggggtgctggatcaaccaagccttttga ttctcgccagcctgttaatggcagcttctctgattggtcatattggggtcaatgtagccaatcctgtggagaagaaactg ttcccgatatcaacggaaattgtccatcctatccgtaagaaactgttcccgatatcaacggaaattgtccatcctatccg tgtaagatatttgaagacaacttcgatagctttgattttcaagtatgggagcacgaaataacagcaaatggaaacgggga tatggaatttcagtattatacaaataacaggagtaacagttatgtaagggatggtgtactgtatattaaaccagtaagtt gttatgttagagatggtgtactttacattaaaccagtaagttgttatgttagagatggtgtactgtacattaaaccagtt agttgttatgttagagatggtgtactgtacgttacaccaacattgactgctaatacttacggagagagcttcttgtcatc tggaactctggatctttggggaagctcaccagcagacagttgtactggtaatacatatgatggctgcaagagaaccggaa caacaaataacatcataaatccaatacaatcggcaagaatacgcagttcacgaggttttaatttcaagtatggtcgaatt gaagttgaagtcatgatgccaaaaggagactggatcatgaccggtaagcctatcgccgtcgcaagtataagaaggcgtct aaatcagggtacactaggcgatagctaccacaaatacggagttgaatggagtgacacttatatcaaatacttgtttgatg gagttgtttataaaactatacagccaggatctgggggattctggatacagggcaacttccagaatgaaaatattcaaaat ccttacagaaatggcggaacaatgtctccattcgaccaggagttttacgtggtgttagacgttgctgttggtggcatgtc cgccttccccgacaactatattaatgttcagtacagtaaaccatggaccacgaatgccaataccgctgccaaggaattct gggaggccaaaaattcatggtatccaacatggaacccgaatgctaacgacggtgaacaagccgcgttgaaagtaaatagt ttgaaagtttggaaaatggcaggtccggcatga |
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Protein
| Protein ID | pfu_aug2.0_1.1_03356.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1.1_03356.t1 MGTAVQCPHEVSGLSSWSQDSSLPNSASVSADLDVTISGSVLLDTSPPEFGGLTIASGGRLVVSPSTATPIILKVKYIHI LGRMDVGSEECPFNGNLEIILKGIKGSYNIQGMGEKFIGVGSGGTLEIHGARKTSWTKLSQTIPKTLDSDYIFKHSVDGD QSYNWVQGVNMYTFNPTNSSDFTYKAYYLSGNPGQDWWNNKGRTEFIADVQNIATGHFVMMSVLYSMKHPSSTTDMSTVY NAMETAFFGSVTGQSIFRTLQHRDAYVLFASKGDTSSVEEIVTRENTAKQSQTAEFSFTDWANDVKYYVKSLVDNVNTWA AKTEYTLTPTNIAYPVINVIDDLENWNEGDTVFCTSTDYNMEQAEIARIVACPTCTSKQFRVESTYPLHFHMCEDVRNYT YPPYLKDNSIHDSFARCVTIHGTDGVLVQDNVALDILGHCYFLEDGGEKYTTFDGNLGAVVREASLTPSDSSPTVFWLTN PLTTTINNVAAGAHTGFWFIFPREPIQLSAGLGFMTWANQTAITKTDNNVAHSCSANGLFVDNLLTSDSDITGNNEYGPK VEPGNNNSPDKLVVFDRFTGYKIRSRAVWIRGGFLKVHRASSRSGEQFLTNSVVLGESALNLGEPDYAWINNNKLFYPRS YPAYWNDQIPRQGFAFYDGPVYVENVWFNRFKSTENYTMGAISFHRNNVFWNAPNSAARNVQFGFDDGPTTGNRVFDGFE EDYGYSNEDGDKGATFIYEDINKQVVKPFPFYVTDSCTYRFHWQMALCPHKYGKLNVRVTAMGPGETRSELEMRRDDIPT EEETLTGERSGQFMAILGGTHSYTLHWQGNIPKEFYIYGDGIEKDYPVRLGICIPKQATFNLYSYSPKWRPNNSSWTRVY TIGEVDSHPDGQNYLYDENKGLLFVKFVSLNTRGPGITDTCNGTCPMLRVSITSGDRTVGSCYSDAYPTYQRTATLTGFL QNDTTSYPKTSVSPPATWGAGSTKPFDSRQPVNGSFSDWSYWGQCSQSCGEETVPDINGNCPSYPXETVPDINGNCPSYP CKIFEDNFDSFDFQVWEHEITANGNGDMEFQYYTNNRSNSYVRDGVLYIKPVSCYVRDGVLYIKPVSCYVRDGVLYIKPV SCYVRDGVLYVTPTLTANTYGESFLSSGTLDLWGSSPADSCTGNTYDGCKRTGTTNNIINPIQSARIRSSRGFNFKYGRI EVEVMMPKGDWIMTGKPIAVASIRRRLNQGTLGDSYHKYGVEWSDTYIKYLFDGVVYKTIQPGSGGFWIQGNFQNENIQN PYRNGGTMSPFDQEFYVVLDVAVGGMSAFPDNYINVQYSKPWTTNANTAAKEFWEAKNSWYPTWNPNANDGEQAALKVNS LKVWKMAGPA |
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