Gene
| Gene Model ID | pfu_aug2.0_1.1_03363 |
|---|---|
| Locus | scaffold1.1 : 954213 ... 958001 : + |
| To GenomeBrowser | scaffold1.1:954213..958001 |
| Genes list of scaffold | scaffold1.1 |
| Synonym | pfu_aug1.0_80547.1_05949 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1.1_03363.t1 | 1 | 1 | PhyH | 4 | 154 | 6.6e-29 | 101.4 | 2.2e-32 | 8.1e-29 | 101.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1.1_03363.t1 | gi|524907727|ref|XP_005108978.1| | PREDICTED: phytanoyl-CoA dioxygenase, peroxisomal-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_1.1_03363.t1 | gi|676496245|ref|XP_009067154.1| | hypothetical protein LOTGIDRAFT_223496 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_1.1_03363.t1 | gi|260828729|ref|XP_002609315.1| | hypothetical protein BRAFLDRAFT_86766 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_1.1_03363.t1 | gi|340373729|ref|XP_003385392.1| | PREDICTED: probable phytanoyl-CoA dioxygenase [Amphimedon queenslandica] | 0.0 |
| pfu_aug2.0_1.1_03363.t1 | gi|524868309|ref|XP_005090958.1| | PREDICTED: uncharacterized protein LOC101859458 [Aplysia californica] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1.1_03363.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1.1_03363.t1 atggcgttatggtgtcatcccggaaatgacgtcactggcatggtggcacgctgcgagaaaatagtcaatacatgtgaagc actgttggaaggcgaagtttatcactatcacacaaaactgatgatgaagaacgccaaaattggaggaagctttctgtggc atcaagactacggatactggtataaaaatggctgcctgtacccagacatgatgactgttttcatcgccattgataaatgt agcaaggaaaacggatgtcttcagatactacgtggatcacatctctgtggacgtattgaccatgtaatggtggctggtca aaccggagctgatgtagaacgtgtggagcagatagaaaaagtatgtcctagggagtccgtggaaatggaacctggtgatg ctctgtttttccacagtaatctgatacacacaagcgcgggtaacgacagcacacaccggagatgggcgttcctgatagca tacaataaagccagtaatgaccctgttataaaacatcattgtcctcagtacactcctttacacaaggttccgaactcaga aattctggattgcaagaacttcacagacatgacaggaaaggatttcctcaacccacaaaatgacaagacagtcagagcag aggacagtcacggcaccaaatga |
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Protein
| Protein ID | pfu_aug2.0_1.1_03363.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1.1_03363.t1 MALWCHPGNDVTGMVARCEKIVNTCEALLEGEVYHYHTKLMMKNAKIGGSFLWHQDYGYWYKNGCLYPDMMTVFIAIDKC SKENGCLQILRGSHLCGRIDHVMVAGQTGADVERVEQIEKVCPRESVEMEPGDALFFHSNLIHTSAGNDSTHRRWAFLIA YNKASNDPVIKHHCPQYTPLHKVPNSEILDCKNFTDMTGKDFLNPQNDKTVRAEDSHGTK |
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