Gene
| Gene Model ID | pfu_aug2.0_1.1_03364 |
|---|---|
| Locus | scaffold1.1 : 964923 ... 976130 : + |
| To GenomeBrowser | scaffold1.1:964923..976130 |
| Genes list of scaffold | scaffold1.1 |
| Synonym | pfu_aug1.0_83460.1_63906 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1.1_03364.t1 | 2 | 1 | PhyH | 23 | 157 | 2.3e-21 | 76.8 | 1.1e-18 | 8.1e-15 | 55.4 |
| pfu_aug2.0_1.1_03364.t1 | 2 | 2 | PhyH | 168 | 191 | 2.3e-21 | 76.8 | 6.2e-08 | 0.00046 | 20.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1.1_03364.t1 | gi|260828731|ref|XP_002609316.1| | hypothetical protein BRAFLDRAFT_86765 [Branchiostoma floridae] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1.1_03364.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1.1_03364.t1 atgacttcagcggaatacacatacaaagatggagaatttacagtaacatcaaaaatgaaaaaggatttcgacgaacatgg ctatataatggtcagaaaccttttggatgcggaggaacttcagaaagtaaagcaagtcctggaagataacgatgaaataa tcaaacatgcttttggggtggcagacggcactggaagagaaagtaaaatggctctttggtcacatcctggaagtgacgta actggcatggttgcaagatgtaataaagtcgctgaaacttgtgaaaagctcctggatggcgaggtttaccactaccatac aaagctgatgatgaagaacgccaatgaaggaggaagtcacctctggcaccaggattatggatactggtacaaaaatggtt gtctatacccagacatgatgacagtttttatctctatagacagatgtagtaaagaaaacggctgcttgcagcataaatct cacaaacttgatcatatcgttgcaggagacgcgttgtttttccattgtaacctcctacacacaagcactggaaacttcag tcctttcaggagatgggcgtttctctgtgcctacaacaaggcctccaataaccctgtcattgttcatcatcatcctcagt acacacctcttgttaagatgcctaacaactctattcgggaatgtcagaatgtgaccgacatgtcaggtaaggaattcatg aacccgaagaatgacagaacaattcgtgtggagaaaaatgtgaaggaggaagctgagaaatga |
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Protein
| Protein ID | pfu_aug2.0_1.1_03364.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1.1_03364.t1 MTSAEYTYKDGEFTVTSKMKKDFDEHGYIMVRNLLDAEELQKVKQVLEDNDEIIKHAFGVADGTGRESKMALWSHPGSDV TGMVARCNKVAETCEKLLDGEVYHYHTKLMMKNANEGGSHLWHQDYGYWYKNGCLYPDMMTVFISIDRCSKENGCLQHKS HKLDHIVAGDALFFHCNLLHTSTGNFSPFRRWAFLCAYNKASNNPVIVHHHPQYTPLVKMPNNSIRECQNVTDMSGKEFM NPKNDRTIRVEKNVKEEAEK |
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