Gene
| Gene Model ID | pfu_aug2.0_1.1_03365 |
|---|---|
| Locus | scaffold1.1 : 976133 ... 980802 : - |
| To GenomeBrowser | scaffold1.1:976133..980802 |
| Genes list of scaffold | scaffold1.1 |
| Synonym | pfu_aug1.0_2367.1_44349 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1.1_03365.t1 | 1 | 1 | VWA | 183 | 357 | 4.2039e-45 | 153.6 | 0.0 | 8.40779e-45 | 152.7 |
| pfu_aug2.0_1.1_03365.t1 | 1 | 1 | VWA_2 | 183 | 358 | 1.9e-17 | 63.8 | 9.6e-21 | 2.9e-17 | 63.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1.1_03365.t1 | gi|676426192|ref|XP_009044545.1| | hypothetical protein LOTGIDRAFT_230072 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_1.1_03365.t1 | gi|524901727|ref|XP_005107268.1| | PREDICTED: collagen alpha-1(XII) chain-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_1.1_03365.t1 | gi|675877310|ref|XP_009024215.1| | hypothetical protein HELRODRAFT_193192 [Helobdella robusta] | 0.0 |
| pfu_aug2.0_1.1_03365.t1 | gi|524902035|ref|XP_005107396.1| | PREDICTED: collagen alpha-1(XII) chain-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_1.1_03365.t1 | gi|340386106|ref|XP_003391549.1| | PREDICTED: uncharacterized protein LOC100636433, partial [Amphimedon queenslandica] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1.1_03365.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1.1_03365.t1 atgggtgaattaaagattatactgctcgtgttcgttgctgcctttggaccatggggcgtggtgggcgtggaccagacaca acagcctggggctgtgggggcaccggtggtggaagccgttataaatttgatcagagagagttgtctttttgccgacgaca aacgcttccttaggagattggcatacgcacagtctcgtgacggatctgatccaaagacgtatagactcaactaccatggc gggatatggcaggttgacgaatcaaagtttatcgaaaccttgaattctagtagactgagcaccgaatacagcataatacg caacgagtttggtatagactggagaaacgtccggtggaccgagctgagaaagcccctatactcggggatagcggcggcac tatacacaaaactacacggtagtatagggtggcggatagaaagccaggcgcagttctaccaacaatacttcaaaccttat gctggcaataacttcactaacctggctaacttactggatctaggatgccatggaaacgaggaaatggatttggtttttgt cgttgacagttctaattctctgagcagtgatgattttgagcgtacaaagatcttcatgcaacaagttgttgatgcattca atatatccagtgacaaaacccaagtgggtgtgttaacatactccaccgctgctaacataaacttttatttgaatcagtac ttaagtaaaggttcacttaatagtgccattggcaatcttcccttcaagagtggctcaaccaatacagcacaggccattac taaagcagtgcaggatgtgtattccacgtaccgcggcggaagaccaaacgcggtgaaagtgatgatcgtggtgactgacg gggaatctgatgataccatatccacgcggcacgccgcggaactcgcaagggccaatgggatcgtgatgttctccgtgggt gttgggagcagagtcaaccaaaatgagctaagtacaattgccacatctccagattgtacccacgtgtttacggtcaccaa ttatgaagaaataaaggcaataaaggaggaaatacaaaaaagttcctgtcaagcaccggtatatataaaatacaacgtaa cctacacctgtgagatccagaaatgtccacctatggcactgataactacgcccgggggtgctacactggagacaaatatg acatgtggtctgggaaacgtctatacagcctttacaaatccctacccaggggagtccttctatgaagtggtcaaacagac atctaatgagaacccgggtgtacttttccgtaattcaagctccactcagacactgtacatcaacgttgtggacgctctga aatctacgacttctagtgaggggtgtattgttcacatcacgccaaagaagggagatcaaacaaatcacaatgtgcgatgt tacattgacggcatagagatcaagtgccctgatgattgcaaagagaaatggaattttcctaatccctgcactgcagataa ccttaagaatggaaagacaaggtttcctcatcccacggacaccacaaaataccttgagtgtgaccagactggtaaactgt acatagtacagtgcccacagtacatgtcctactaccagaactgtttacagtgcctaggtaacgacaccatggccagttgt gtctccggtaaggtccccctcaatcaaagcgttgccaacccttgctctctgagtcaacttcttgccggacatttcttctt caagtacgcaccagacgagaccaagttcatacattgtgatgtatggggcaagccttggttactgaactgtccaacaggtg aggtttgggaccaccctgacttgacctgtgtcagacagacgggatacaaaagcccatgtcgagggctgggacctactgga ccgtttttctacccccatccctgtgacaaacacaaatacattcattgtgataatcatggacaagagttcattataagctg tagcaacccacacttcgtgtacaatcctaatattgtgagatgtgaatccagcctccattacaatcctcccgatcctaccc cgggtacgatttgtcccgatggcagcatctacatggggtacaccgatcatgcaaagccagtacctactacctatacccgc tatgtgacagattccagtgcaggataccgatgctgcagtacatgtcctttgtttacatcaccctgtacaaacgccaacat cgctgccggtaagctgttccaccccctggttggtgaccgccatcattacatacagtgtgacctgaccggaagaatgtact gtccactatcgtgtaacagtaacacaaatggcttggactactttgaccctctgaccagtacctgtgtggatggctcactg accattgacaatatagttggctga |
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Protein
| Protein ID | pfu_aug2.0_1.1_03365.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1.1_03365.t1 MGELKIILLVFVAAFGPWGVVGVDQTQQPGAVGAPVVEAVINLIRESCLFADDKRFLRRLAYAQSRDGSDPKTYRLNYHG GIWQVDESKFIETLNSSRLSTEYSIIRNEFGIDWRNVRWTELRKPLYSGIAAALYTKLHGSIGWRIESQAQFYQQYFKPY AGNNFTNLANLLDLGCHGNEEMDLVFVVDSSNSLSSDDFERTKIFMQQVVDAFNISSDKTQVGVLTYSTAANINFYLNQY LSKGSLNSAIGNLPFKSGSTNTAQAITKAVQDVYSTYRGGRPNAVKVMIVVTDGESDDTISTRHAAELARANGIVMFSVG VGSRVNQNELSTIATSPDCTHVFTVTNYEEIKAIKEEIQKSSCQAPVYIKYNVTYTCEIQKCPPMALITTPGGATLETNM TCGLGNVYTAFTNPYPGESFYEVVKQTSNENPGVLFRNSSSTQTLYINVVDALKSTTSSEGCIVHITPKKGDQTNHNVRC YIDGIEIKCPDDCKEKWNFPNPCTADNLKNGKTRFPHPTDTTKYLECDQTGKLYIVQCPQYMSYYQNCLQCLGNDTMASC VSGKVPLNQSVANPCSLSQLLAGHFFFKYAPDETKFIHCDVWGKPWLLNCPTGEVWDHPDLTCVRQTGYKSPCRGLGPTG PFFYPHPCDKHKYIHCDNHGQEFIISCSNPHFVYNPNIVRCESSLHYNPPDPTPGTICPDGSIYMGYTDHAKPVPTTYTR YVTDSSAGYRCCSTCPLFTSPCTNANIAAGKLFHPLVGDRHHYIQCDLTGRMYCPLSCNSNTNGLDYFDPLTSTCVDGSL TIDNIVG |
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