Gene
| Gene Model ID | pfu_aug2.0_1.1_03368 |
|---|---|
| Locus | scaffold1.1 : 1014883 ... 1027095 : + |
| To GenomeBrowser | scaffold1.1:1014883..1027095 |
| Genes list of scaffold | scaffold1.1 |
| Synonym | pfu_aug1.0_25298.1_11686 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| kelch-like protein 20 | GO:0004842 GO:0005802 GO:0006895 GO:0016605 GO:0019964 GO:0031463 GO:0043066 GO:0043161 GO:1990390 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1.1_03368.t1 | 1 | 1 | BTB | 39 | 144 | 7.1e-33 | 112.9 | 8.7e-36 | 1.6e-32 | 111.7 |
| pfu_aug2.0_1.1_03368.t1 | 1 | 1 | BACK | 150 | 232 | 2.5e-28 | 97.9 | 3.3e-31 | 6.1e-28 | 96.6 |
| pfu_aug2.0_1.1_03368.t1 | 6 | 1 | Kelch_1 | 288 | 323 | 0.0 | 297.2 | 2.2e-12 | 4.1e-09 | 35.8 |
| pfu_aug2.0_1.1_03368.t1 | 6 | 1 | Kelch_2 | 288 | 322 | 5.6e-30 | 101.9 | 3.7e-05 | 0.069 | 12.9 |
| pfu_aug2.0_1.1_03368.t1 | 6 | 1 | Kelch_5 | 288 | 297 | 6.0e-11 | 42.0 | 5.2 | 9600.0 | -3.3 |
| pfu_aug2.0_1.1_03368.t1 | 6 | 1 | Kelch_3 | 289 | 333 | 4.8e-36 | 122.1 | 8.2e-07 | 0.0015 | 18.6 |
| pfu_aug2.0_1.1_03368.t1 | 6 | 1 | Kelch_6 | 291 | 326 | 0.0 | 182.2 | 7.5e-08 | 0.00014 | 21.8 |
| pfu_aug2.0_1.1_03368.t1 | 6 | 1 | Kelch_4 | 291 | 322 | 6.1e-39 | 131.5 | 9.8e-05 | 0.18 | 11.5 |
| pfu_aug2.0_1.1_03368.t1 | 6 | 2 | Kelch_1 | 325 | 364 | 0.0 | 297.2 | 1.8e-17 | 3.3e-14 | 52.1 |
| pfu_aug2.0_1.1_03368.t1 | 6 | 2 | Kelch_4 | 325 | 364 | 6.1e-39 | 131.5 | 9.4e-09 | 1.7e-05 | 24.4 |
| pfu_aug2.0_1.1_03368.t1 | 6 | 2 | Kelch_2 | 325 | 364 | 5.6e-30 | 101.9 | 2.3e-08 | 4.2e-05 | 23.1 |
| pfu_aug2.0_1.1_03368.t1 | 6 | 2 | Kelch_5 | 325 | 361 | 6.0e-11 | 42.0 | 0.00079 | 1.5 | 8.8 |
| pfu_aug2.0_1.1_03368.t1 | 6 | 2 | Kelch_6 | 326 | 364 | 0.0 | 182.2 | 5.0e-10 | 9.4e-07 | 28.7 |
| pfu_aug2.0_1.1_03368.t1 | 6 | 2 | Kelch_3 | 336 | 381 | 4.8e-36 | 122.1 | 9.8e-08 | 0.00018 | 21.5 |
| pfu_aug2.0_1.1_03368.t1 | 6 | 3 | Kelch_6 | 373 | 421 | 0.0 | 182.2 | 7.0e-09 | 1.3e-05 | 25.1 |
| pfu_aug2.0_1.1_03368.t1 | 6 | 3 | Kelch_1 | 374 | 418 | 0.0 | 297.2 | 9.9e-19 | 1.8e-15 | 56.1 |
| pfu_aug2.0_1.1_03368.t1 | 6 | 3 | Kelch_5 | 374 | 394 | 6.0e-11 | 42.0 | 0.0041 | 7.7 | 6.5 |
| pfu_aug2.0_1.1_03368.t1 | 6 | 3 | Kelch_2 | 377 | 417 | 5.6e-30 | 101.9 | 7.5e-05 | 0.14 | 11.9 |
| pfu_aug2.0_1.1_03368.t1 | 6 | 3 | Kelch_4 | 379 | 417 | 6.1e-39 | 131.5 | 7.1e-09 | 1.3e-05 | 24.8 |
| pfu_aug2.0_1.1_03368.t1 | 6 | 3 | Kelch_3 | 384 | 428 | 4.8e-36 | 122.1 | 5.5e-09 | 1.0e-05 | 25.5 |
| pfu_aug2.0_1.1_03368.t1 | 6 | 4 | Kelch_1 | 420 | 464 | 0.0 | 297.2 | 3.1e-20 | 5.7e-17 | 60.9 |
| pfu_aug2.0_1.1_03368.t1 | 6 | 4 | Kelch_4 | 420 | 464 | 6.1e-39 | 131.5 | 4.7e-11 | 8.7e-08 | 31.8 |
| pfu_aug2.0_1.1_03368.t1 | 6 | 4 | Kelch_2 | 420 | 465 | 5.6e-30 | 101.9 | 1.3e-08 | 2.4e-05 | 23.8 |
| pfu_aug2.0_1.1_03368.t1 | 6 | 4 | Kelch_6 | 421 | 467 | 0.0 | 182.2 | 2.6e-14 | 4.8e-11 | 42.3 |
| pfu_aug2.0_1.1_03368.t1 | 6 | 4 | Kelch_5 | 421 | 456 | 6.0e-11 | 42.0 | 2.7e-05 | 0.05 | 13.5 |
| pfu_aug2.0_1.1_03368.t1 | 6 | 4 | Kelch_3 | 430 | 473 | 4.8e-36 | 122.1 | 1.6e-08 | 3.0e-05 | 24.0 |
| pfu_aug2.0_1.1_03368.t1 | 6 | 5 | Kelch_1 | 467 | 509 | 0.0 | 297.2 | 1.5e-17 | 2.8e-14 | 52.3 |
| pfu_aug2.0_1.1_03368.t1 | 6 | 5 | Kelch_5 | 467 | 495 | 6.0e-11 | 42.0 | 0.0025 | 4.6 | 7.3 |
| pfu_aug2.0_1.1_03368.t1 | 6 | 5 | Kelch_6 | 468 | 514 | 0.0 | 182.2 | 5.4e-11 | 1.0e-07 | 31.8 |
| pfu_aug2.0_1.1_03368.t1 | 6 | 5 | Kelch_4 | 472 | 508 | 6.1e-39 | 131.5 | 4.3e-08 | 8.0e-05 | 22.3 |
| pfu_aug2.0_1.1_03368.t1 | 6 | 5 | Kelch_2 | 473 | 508 | 5.6e-30 | 101.9 | 0.002 | 3.7 | 7.4 |
| pfu_aug2.0_1.1_03368.t1 | 6 | 5 | Kelch_3 | 477 | 522 | 4.8e-36 | 122.1 | 1.4e-08 | 2.5e-05 | 24.2 |
| pfu_aug2.0_1.1_03368.t1 | 6 | 6 | Kelch_1 | 514 | 559 | 0.0 | 297.2 | 2.9e-14 | 5.3e-11 | 41.8 |
| pfu_aug2.0_1.1_03368.t1 | 6 | 6 | Kelch_4 | 514 | 555 | 6.1e-39 | 131.5 | 9.0e-06 | 0.017 | 14.9 |
| pfu_aug2.0_1.1_03368.t1 | 6 | 6 | Kelch_2 | 514 | 558 | 5.6e-30 | 101.9 | 2.6e-07 | 0.00049 | 19.7 |
| pfu_aug2.0_1.1_03368.t1 | 6 | 6 | Kelch_6 | 515 | 562 | 0.0 | 182.2 | 4.0e-11 | 7.4e-08 | 32.2 |
| pfu_aug2.0_1.1_03368.t1 | 6 | 6 | Kelch_5 | 515 | 546 | 6.0e-11 | 42.0 | 0.059 | 110.0 | 2.9 |
| pfu_aug2.0_1.1_03368.t1 | 6 | 6 | Kelch_3 | 530 | 567 | 4.8e-36 | 122.1 | 0.00011 | 0.2 | 11.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1.1_03368.t1 | gi|558231619|ref|XP_006139427.1| | PREDICTED: kelch-like protein 20 isoform X1 [Pelodiscus sinensis] | 0.0 |
| pfu_aug2.0_1.1_03368.t1 | gi|669272685|ref|XP_008628384.1| | PREDICTED: kelch-like protein 20 [Corvus brachyrhynchos] | 0.0 |
| pfu_aug2.0_1.1_03368.t1 | gi|602636704|ref|XP_007425205.1| | PREDICTED: kelch-like protein 20 isoform X1 [Python bivittatus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1.1_03368.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1.1_03368.t1 atgagcagtcagacggcagacctgcttcagcagagtggtttggatcgtgctccgtctccagccagtcttgcctacacctc cgacaaacaccctcgtcatacactggaagccattaatgttctacgcaagcacagagaactatgtgatgtagtgttaatcg tagggcagaggaaaatattcgcacacagagtaatattgtcagcatgtagtccgtatttccatgctatgtttacgggagag ttagccgagagtcgccagactgaggtcaccatcagagatattgatgaagccgctatggaacttctcatagacttctgtta tacttcaaacattacagtagaagaaagtaatgtccagacactgttaccagccgcatgtttacttcagctagctgaaattc aggacgtgtgttgtgaatttttaaaacgacaattagatccctcaaattgcctgggaattcgtgcattcgctgacactcat gcctgcagagacttactacgtattgcagacaaatttacacagcataattttcaagaggtaatggagagtgaggagtttat gttactgccggtaaaccagttggtggatatcatctctagtgacgaacttaacgtgcgtaacgaggagcaagtgtacacag ccgtgatgggatgggtgaaatacaacatacaggatagaagacaacatctatcactggtaagtatgctgaaaggcctgtta anagtaggcagtgatttactgataaagagcgacgatacgtgtcgagacctgctggacgaggccaagaattacctgctcct tccccaggagagacctctgatgcagggaccaaggacacgcccacggaaaccgatacgctgtggagaagttttgtatgcgg tgggagggtggtgcagtggtgatgcgatatctagtgtagagaagtttgatcctcagaccagcgagtggcgcatggtggca cccatgtctaagcggcgctgtggcgtaggggtggctgtgctaaatgacctgctatatgctgtaggggggcatgatggcca atcatacctgaacagtatagaaaggtttgatccccagacaaaccagtggagtggtgatgtagcaccgaccagttcttgcc gtacaagtgttggagtagccgtattagaaaattacatgtatgctgtaggtggacaggatggagtatcatgtctaaatttt gtagagaggtatgacccgcagttaaacaagtggacaaaggtagcatctatgagtaccagacggctgggtgtaggcgtggc agtattaggggggttcctgtatgctgtgggagggtcggatggtacctcccctctaaatacagttgagcgttacgatccac gcactaacagatggactcccgtgtcccccatgggaacgagacgaaaacacctgggtgtggcagttttcaataacatgatc tatgcagtaggagggagggacgatactacagaactgagtagtgctgagagatataacccacagacaaatacatggcaacc tgtggtggccatgacgtcaaggagaagtggggttggtttagctgttgtaaacggtcagttgatggccatcggtggatttg atggaacaacatatttaaagacaatagaagtgtttgatgccgagacaaactgttggaagttagtgagcggtatgaactac agaagactcgggggtggagtgggcgtggtcagaatgccccagcatgaatctcatttgtggtag |
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Protein
| Protein ID | pfu_aug2.0_1.1_03368.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1.1_03368.t1 MSSQTADLLQQSGLDRAPSPASLAYTSDKHPRHTLEAINVLRKHRELCDVVLIVGQRKIFAHRVILSACSPYFHAMFTGE LAESRQTEVTIRDIDEAAMELLIDFCYTSNITVEESNVQTLLPAACLLQLAEIQDVCCEFLKRQLDPSNCLGIRAFADTH ACRDLLRIADKFTQHNFQEVMESEEFMLLPVNQLVDIISSDELNVRNEEQVYTAVMGWVKYNIQDRRQHLSLVSMLKGLL XVGSDLLIKSDDTCRDLLDEAKNYLLLPQERPLMQGPRTRPRKPIRCGEVLYAVGGWCSGDAISSVEKFDPQTSEWRMVA PMSKRRCGVGVAVLNDLLYAVGGHDGQSYLNSIERFDPQTNQWSGDVAPTSSCRTSVGVAVLENYMYAVGGQDGVSCLNF VERYDPQLNKWTKVASMSTRRLGVGVAVLGGFLYAVGGSDGTSPLNTVERYDPRTNRWTPVSPMGTRRKHLGVAVFNNMI YAVGGRDDTTELSSAERYNPQTNTWQPVVAMTSRRSGVGLAVVNGQLMAIGGFDGTTYLKTIEVFDAETNCWKLVSGMNY RRLGGGVGVVRMPQHESHLW |
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