Gene
| Gene Model ID | pfu_aug2.0_1.1_03372 |
|---|---|
| Locus | scaffold1.1 : 1111432 ... 1144834 : + |
| To GenomeBrowser | scaffold1.1:1111432..1144834 |
| Genes list of scaffold | scaffold1.1 |
| Synonym | pfu_aug1.0_10151.1_17587 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1.1_03372.t1 | 2 | 1 | AAA_30 | 241 | 272 | 4.9e-14 | 52.3 | 4.5 | 7400.0 | -3.7 |
| pfu_aug2.0_1.1_03372.t1 | 3 | 1 | Helitron_like_N | 599 | 752 | 3.4e-25 | 88.8 | 8.3e-28 | 1.4e-24 | 86.8 |
| pfu_aug2.0_1.1_03372.t1 | 2 | 1 | PIF1 | 1151 | 1192 | 9.8e-29 | 100.4 | 2.3 | 3700.0 | -3.5 |
| pfu_aug2.0_1.1_03372.t1 | 3 | 2 | Helitron_like_N | 1151 | 1183 | 3.4e-25 | 88.8 | 1.6 | 2700.0 | -2.1 |
| pfu_aug2.0_1.1_03372.t1 | 2 | 2 | PIF1 | 1259 | 1591 | 9.8e-29 | 100.4 | 2.9e-31 | 4.7e-28 | 98.1 |
| pfu_aug2.0_1.1_03372.t1 | 2 | 2 | AAA_30 | 1259 | 1473 | 4.9e-14 | 52.3 | 1.4e-16 | 2.3e-13 | 50.1 |
| pfu_aug2.0_1.1_03372.t1 | 1 | 1 | AAA_19 | 1284 | 1345 | 6.1e-06 | 25.8 | 8.3e-09 | 1.4e-05 | 24.7 |
| pfu_aug2.0_1.1_03372.t1 | 3 | 3 | Helitron_like_N | 1304 | 1349 | 3.4e-25 | 88.8 | 5.9 | 9600.0 | -3.9 |
Transcript
| Transcript ID | pfu_aug2.0_1.1_03372.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1.1_03372.t1 atgcctaggaagaagttttggagaagaggtgcaactcaaaagaagggggatagccacccctccaacaagggcttgacatt tgacattgaccaggttaatcctcctgtaaaaaaggtcatggacgaccaggttaatcctcctgtaaaaaaggtcattggtg accaggttaatcctcctgctaaaaaaaaggtcatatttcagaatattgctagaaaatctaccagaaaccttgctagaata tctgctagaaaccttgctagaaaatctaccacaaaatctgctgtatcaaatagttctacattgctttgtcaatatcaaat aagaaatgaggaatccatgatcgatgcacacatgcctgatagccatgatgatacacaaactgttaggcaaaggaatttga ataatgatgaagctggtatcgtacattcatcagtaagcactatatttgcctcacacaatcaaagtgatgacagttgcagt atagatcttcagtctcaatttgaaattttacctgtaaaagtagagaagattagacacggcttctttgactttgagcagaa gggtacagagagcacaacagacaggaaaaagtatatgagagaatacatgcaaaagaaacgaaaaaacaaagatttcaaaa gtaaagaattgcaggataagcaaaaggcacgacttgatgagcaatacagggaaaaggagagacagagggaattatataac aagaaaaagtgtagacttgatcagttttatagggaaaaagaagcatttgataaaagaaaagcgagagataacagtcagca cagagaaatagaaaagcaaaaagaagttcttggtaaaagaaaagctagagataatactgaatacagagaagtagaaaggc aaaaagagttatctagcaagaggaattctagactagatcagttttataaggaaaaagaagttcttgaattaaatttacat cctatggaagagagagttgttgctctgagaatccctttcatgcaaatgagagagttgcctagaggaggacaatactgtgt gaaaggaaatgtagtaaatgttccagtagatattcagcctgttataaatgcattgcctagacaaatggatgatactggta ccatcccaattaaattgaaaaagaaaatgtcatacaaaaaatgtgacttcaaagaaaacatacggccaaatattgtattg tcagccttacattggttgatggctgaaagtgacttgtacaaaaactctggtgttcaagttgatgaatcttgggagcaaag tattacaaatgatagtcgagagatagtaagggagtttgtatccaatgaatcaagtggaacaataacaaatgtcattaata ataatgaacaaagtgcagattctgggaaagatacaattgacgaaattggatatgaatctgataattacagtgagattgac agtagtgaaaatgtaacaggaaatgcagatacattgttggaagatgaaagtttgaatactgacaaatcctatacatttgc cccaggagaaggacaacatccattaagcctttacactgatcatgatgcagagtatttgtcttttccatcaatattttgtg gacaaagaagaccaactaataaagaaagattagtcccagttcattacacagatattgcaaaatgggaattaagaagtcaa gatcggagagctgcacagtcagtgccaaacatattcttcaaacttaagaaaatacaattgaaacagataagtgacaaagt acatttagcagtgagaagaataaaaacgaaagggaaaaaaataactgcagcacaagctcgagatcagtctacacttgata gaattgtacgtttagatgaaggctattacatatttagacagttacgcaattctcctgcctatttagctacaaaaaagaaa gatatttttgcaatgattagacaactaggtttgcccacatggtttatgtccttatcctcagcagacacaagatggccatt tttattgaaatctctagcgaaacttgatgggaaaatattatcggatgatgatgttagtaatttgtcatggcaagagagaa gtacattagttcaaaaggatcccatcgcttgttctcgcatatttaatgatagagttcaacagttcataaaaatctttctg aaaagcccacatcaaccggttggtcacgtaacagactacttttaccgtgttgaattccagcaaagaggctctccgcatat ccatatgcttgtgtgggtagatgatgcacctaaatatcccaaagactcggatgaagcagttgttgaatttgttgacaatt atgttacatgttcaaatgaaaaggataagttgtctactttaattgagctgcaaacacataaacattccaaaacatgcaga aaaaagggcaaagctgtatgtagatttggttttccacttccaccattgagaacaactatgcttttggaaccgcttgagac agatattgagaagtacaagaagaggtatgatgaaatccagaacaagatgaacaagtacaaagatggaatgaatttttcgt acgaccagttcttaaaggaagtagtagacatgccacaggatgagtatattaagtgtattagaagttccatcaatggcccc aaagtttttttgaaaaggacaccttcagaggttagagtcaacatgtacaatgaaaatttgctgcaagcttggaatgcaaa tattgacttgcagttcgtccttgatccttacgcttgtgcaatgtatattgtttcctacatcagcaaatcacaaagaggaa tgagtgctttgatggatagagcatgcaaagaagcaaggcagggtaatatggacattaaaaaacaagttcgtcacattgga aatcactttctgaatagtgttgaagtcagtgcacaagaagcatcatatctagtgttacaaatgccattaacaaaagggtc aagggatgtcatattcataaatacatcgcctcctcatgaaagagtcgtcttattgaaacaacagtctgatcttatggaac taagtccagagtctactgacattcattaccaaaatatcatagcacgttactcaaaaagaccaacacagcttgaaaattgg tgcttggcagattatgcctctcaactggaagtgaaatatcctgatgacacaaagaaaaaggacattcagcaagagataaa tgatgatgataatatagacgcagtcgcgaatggagatgaggattcagaattttcagaggatgatattcttgtcaccctaa aaaatggtattatcatcagaagacgcatacatgatctgattttgcgatatgtacactacaatcttaagactgatccagaa aaccattacagagagaagttacttttattcatgccatggcgagatgaagatgttgatttattgaatggacataacagtta ccaggagcactacaagcaagttcactttttagttggtcataaggcaaattattatgagaaaaatattgacgagattgagc gagctatgcaacaggcagaagaagaatttgcacagcatgatgaaatagccccaaatgcccaacaaagaaatgctgatgat gaagctgaaggtcagcaagaagccagggactttgtacactttaatcctgatagacctcttgaacacagacgatacgacat aggtgctgatattgctgcttcaacttcagtcccaagcattgaatgtcatagtgacagaatatctgatgacgattatttaa aattagtcaggagtctgaatatcaaacaaagagaattttttacacatgttctccactggattaaaacaaaagatcagccg atttatgcatttttatcgggaggtgctggcgttggaaaatctgttttgattaaagccatctaccaggctttacatagaca gttacactcaatagagggagaagatccagatgacatcagaatcttactttgtgcttttactgggaaagcagcatataaca tcaatggtgtgacaattgcatctgcattccacaagaaatataatcagaataatcagtcgatgagctccgatgaattgaac actttccgaatgaaatatagaaatctttctgtggtgataattgatgaaatatcaatggttggaggcaaaatgttaagttt cattgactgcagattgaaacagttgactgcaacaaataaaccattcggtggtataagtatcattgctgtaggagacctgt ttcagttacagccagtaggtgactcttggatatttaacgacttgtctgatggacctcaagctctagcaacaaatctatgg aaagaacatttcaggatatttgaactgactcagattatgcgacaaaaagatgacatgtattttgcaaatcttctcaacag attgcgaaccaatgatttaacagaggacgacaaaattgaaattgacaagcacaaagtaaatccaactcaggacaactatc caaagaatgctcctcatttgtttattgaaaataaatttgtagacaacttcaataaagagttcattggaaagttatctaca atgaaggttgaagtattgagtcatgatgcagtaatagctgatttaccacaatcgagcaaagatagactcctgaaaagctt gccaatggattcgagcaaaacagcaaacttagctcattcattgattcttgcagtcggtatgatatatgacatcactatta atctagatgttaatgatggaatagcaaatggttctatctgtattatcaaaaatattgaaaatcgaattcttcaaacttca agaccaagcattgtatgggttttattcactgacttgaccattggatcaattacaagacagaagtataagcatttgtacca tgcatacattgaccctttatggacaccaatttttgatgtgaatcgaaattttctctacaattacaaatcttatcaaagaa cacaatttccacttaagccagcagctgctaaaactgttcacaaggcacaaggatgtacagtagatgagattgttattgac ctatcacagacaagaacgagaaaatctgcacatattcattatgtagcgatgagcagagtaagaagatttgaaaatctaca tattttgaattttaattacgctgcactaggaacagatgatagagtcaaagacgaaatgaagagaattcgagaggaagcaa acttagaattatgttacaaaactttatatgatgtagactcgtgtcatttcaaattagctttcaacaatgcacggtcgttt cacaagcatttcactgatatttctgtagatccaaatatgttagccgcagatgtaattggtatcatggagtcgaggctata tagttcagatctagatgaaacttacgcactcaatggttttgagatgcatagatgtgatcaaatcggtcaaggaagtagca aaagacctagtcatggactcgttttgtatctaaaggatgacatggaatgtaagcaagtactcaaacacagtacagataag gtggaatggttgctctgtgaaacatctcatcctacaactggatcgataaacctattgcttgtatataaatctccatcctg ctcactttctgagttcaaacactcaactttgcgctaccttttaccacaagtagatttaagtcaacccttacttgcatttg gtgacttcaactttgatgttggctctggaaattcagaatttttgcattttatgaatgagacgcttcattccacccaatca acaagtcttgaaatggtaaaacaaaagcttgacttcaaaaagaaaaaactggatccacctcaacagtcaatcttaaaatc cctgtcagacctaacggaggagaacatgttggtaacactaaatgtaaagctgttgaattttacgaatgaagaaacagaag tttacacaaagtatggggctaagtcagtccgcaatgccataattgcagataaatcaggaaccaaaaccatttctttttgg gggaacgtaattgcttcagtgaaacagggaagcttttataacctaaccaatgtcgttacaaaaaaatttgatgaaaacat aactctatcaacaactacgaatacaaaagcgctgcaaataccaattttcgatgaggtaaaagaagaagatgttccgatac aacatactgagaacattgttattaccagtataaatgtaataacttcttatagatgttccaacaaatcgtgcagtgcaaca tttcctattcaagaactgaaaggaacatttatgaaatgttccacatgtaaaatgaaacagaaagttgaaaacatcattaa gtccacatcagctaaagcagtctgcaaaacagaaacagactgtaacaaacaaatcttgattagccagcaagctctagaaa attatttaggaaaggaaaataatgaactaatgaaggatgaagatgcgcttgaggatcacatccttacagttgaaaatttc agaatcacaacaggaaataaccgagagatatgcatcaaattggaatctgcgtcaacatgccgaccgccactcaagccacg gaaactatcgagacactgccgaagattaccgagttaa |
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Protein
| Protein ID | pfu_aug2.0_1.1_03372.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1.1_03372.t1 MPRKKFWRRGATQKKGDSHPSNKGLTFDIDQVNPPVKKVMDDQVNPPVKKVIGDQVNPPAKKKVIFQNIARKSTRNLARI SARNLARKSTTKSAVSNSSTLLCQYQIRNEESMIDAHMPDSHDDTQTVRQRNLNNDEAGIVHSSVSTIFASHNQSDDSCS IDLQSQFEILPVKVEKIRHGFFDFEQKGTESTTDRKKYMREYMQKKRKNKDFKSKELQDKQKARLDEQYREKERQRELYN KKKCRLDQFYREKEAFDKRKARDNSQHREIEKQKEVLGKRKARDNTEYREVERQKELSSKRNSRLDQFYKEKEVLELNLH PMEERVVALRIPFMQMRELPRGGQYCVKGNVVNVPVDIQPVINALPRQMDDTGTIPIKLKKKMSYKKCDFKENIRPNIVL SALHWLMAESDLYKNSGVQVDESWEQSITNDSREIVREFVSNESSGTITNVINNNEQSADSGKDTIDEIGYESDNYSEID SSENVTGNADTLLEDESLNTDKSYTFAPGEGQHPLSLYTDHDAEYLSFPSIFCGQRRPTNKERLVPVHYTDIAKWELRSQ DRRAAQSVPNIFFKLKKIQLKQISDKVHLAVRRIKTKGKKITAAQARDQSTLDRIVRLDEGYYIFRQLRNSPAYLATKKK DIFAMIRQLGLPTWFMSLSSADTRWPFLLKSLAKLDGKILSDDDVSNLSWQERSTLVQKDPIACSRIFNDRVQQFIKIFL KSPHQPVGHVTDYFYRVEFQQRGSPHIHMLVWVDDAPKYPKDSDEAVVEFVDNYVTCSNEKDKLSTLIELQTHKHSKTCR KKGKAVCRFGFPLPPLRTTMLLEPLETDIEKYKKRYDEIQNKMNKYKDGMNFSYDQFLKEVVDMPQDEYIKCIRSSINGP KVFLKRTPSEVRVNMYNENLLQAWNANIDLQFVLDPYACAMYIVSYISKSQRGMSALMDRACKEARQGNMDIKKQVRHIG NHFLNSVEVSAQEASYLVLQMPLTKGSRDVIFINTSPPHERVVLLKQQSDLMELSPESTDIHYQNIIARYSKRPTQLENW CLADYASQLEVKYPDDTKKKDIQQEINDDDNIDAVANGDEDSEFSEDDILVTLKNGIIIRRRIHDLILRYVHYNLKTDPE NHYREKLLLFMPWRDEDVDLLNGHNSYQEHYKQVHFLVGHKANYYEKNIDEIERAMQQAEEEFAQHDEIAPNAQQRNADD EAEGQQEARDFVHFNPDRPLEHRRYDIGADIAASTSVPSIECHSDRISDDDYLKLVRSLNIKQREFFTHVLHWIKTKDQP IYAFLSGGAGVGKSVLIKAIYQALHRQLHSIEGEDPDDIRILLCAFTGKAAYNINGVTIASAFHKKYNQNNQSMSSDELN TFRMKYRNLSVVIIDEISMVGGKMLSFIDCRLKQLTATNKPFGGISIIAVGDLFQLQPVGDSWIFNDLSDGPQALATNLW KEHFRIFELTQIMRQKDDMYFANLLNRLRTNDLTEDDKIEIDKHKVNPTQDNYPKNAPHLFIENKFVDNFNKEFIGKLST MKVEVLSHDAVIADLPQSSKDRLLKSLPMDSSKTANLAHSLILAVGMIYDITINLDVNDGIANGSICIIKNIENRILQTS RPSIVWVLFTDLTIGSITRQKYKHLYHAYIDPLWTPIFDVNRNFLYNYKSYQRTQFPLKPAAAKTVHKAQGCTVDEIVID LSQTRTRKSAHIHYVAMSRVRRFENLHILNFNYAALGTDDRVKDEMKRIREEANLELCYKTLYDVDSCHFKLAFNNARSF HKHFTDISVDPNMLAADVIGIMESRLYSSDLDETYALNGFEMHRCDQIGQGSSKRPSHGLVLYLKDDMECKQVLKHSTDK VEWLLCETSHPTTGSINLLLVYKSPSCSLSEFKHSTLRYLLPQVDLSQPLLAFGDFNFDVGSGNSEFLHFMNETLHSTQS TSLEMVKQKLDFKKKKLDPPQQSILKSLSDLTEENMLVTLNVKLLNFTNEETEVYTKYGAKSVRNAIIADKSGTKTISFW GNVIASVKQGSFYNLTNVVTKKFDENITLSTTTNTKALQIPIFDEVKEEDVPIQHTENIVITSINVITSYRCSNKSCSAT FPIQELKGTFMKCSTCKMKQKVENIIKSTSAKAVCKTETDCNKQILISQQALENYLGKENNELMKDEDALEDHILTVENF RITTGNNREICIKLESASTCRPPLKPRKLSRHCRRLPS |
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